RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TREM2Q9NZC2 230 aa7.27□□□□□ -1.25
TRAF3-209ENST00000560463 COPZ2Q9P299 210 aa7.27□□□□□ -1.25
TRAF3-209ENST00000560463 RNF7Q9UBF6 113 aa7.27□□□□□ -1.25
TRAF3-209ENST00000560463 PPP1R3CQ9UQK1 317 aa7.27□□□□□ -1.25
TRAF3-209ENST00000560463 KCNK7Q9Y2U2 307 aa7.27□□□□□ -1.25
TRAF3-209ENST00000560463 NPTNQ9Y639 398 aa7.27□□□□□ -1.25
TRAF3-209ENST00000560463 CACNG2Q9Y698 323 aa7.27□□□□□ -1.25
TRAF3-209ENST00000560463 UTP20O75691 2785 aaKnown RBP7.27□□□□□ -1.25
TRAF3-209ENST00000560463 LRRC30A6NM36 301 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 A6NNC1 897 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 MCRIP1C9JLW8 97 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 H7C1Q1 480 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 DEGS1O15121 323 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 AKAIN1P0CW23 69 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 IRF2P14316 349 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 DTYMKP23919 212 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 MDH2P40926 338 aaKnown RBP7.26□□□□□ -1.25
TRAF3-209ENST00000560463 CCL8P80075 99 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 GUCA2AQ02747 115 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 SRSF7Q16629 238 aaKnown RBP eCLIP7.26□□□□□ -1.25
TRAF3-209ENST00000560463 RNASE12Q5GAN4 147 aaKnown RBP7.26□□□□□ -1.25
TRAF3-209ENST00000560463 NKAPLQ5M9Q1 402 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 SHEQ5VZ18 495 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 OLFML2AQ68BL7 652 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 Q6P435 159 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 DCDC5Q6ZRR9 648 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 ZNF826PQ6ZT77 177 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 MOGAT3Q86VF5 341 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 C1orf87Q8N0U7 546 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 GCSAMQ8N6F7 178 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 DUSP18Q8NEJ0 188 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 LRRC29Q8WV35 223 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 NUDCD2Q8WVJ2 157 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 CMSS1Q9BQ75 279 aaKnown RBP7.26□□□□□ -1.25
TRAF3-209ENST00000560463 C11orf54Q9H0W9 315 aaPredicted RBP7.26□□□□□ -1.25
TRAF3-209ENST00000560463 RIMS4Q9H426 269 aaPredicted RBP7.26□□□□□ -1.25
TRAF3-209ENST00000560463 ELF5Q9UKW6 265 aaPredicted RBP7.26□□□□□ -1.25
TRAF3-209ENST00000560463 ANAPC10Q9UM13 185 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 EDARQ9UNE0 448 aa7.26□□□□□ -1.25
TRAF3-209ENST00000560463 IGHV3-64DA0A0J9YX35 117 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 LINC00854A0A1B0GVQ3 168 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 FAM240BA0A1B0GVZ2 78 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 FAM221AA4D161 298 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 CLEC18AA5D8T8 446 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 SSX5O60225 188 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 DANCRP0C864 163 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 ZNF44P15621 663 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 SLC6A1P30531 599 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 KCNJ3P48549 501 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 SNU13P55769 128 aaKnown RBP7.25□□□□□ -1.25
TRAF3-209ENST00000560463 MEF2DQ14814 521 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 ACTBL2Q562R1 376 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 C11orf71Q6IPW1 123 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 STEAP1BQ6NZ63 245 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 CLEC18BQ6UXF7 455 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 NRARPQ7Z6K4 114 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 DTX2Q86UW9 622 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 HOGA1Q86XE5 327 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 BATF2Q8N1L9 274 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 CENPSQ8N2Z9 138 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 SUMF2Q8NBJ7 301 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 CLEC18CQ8NCF0 446 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 ENKURQ8TC29 256 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 SULT4A1Q9BR01 284 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 FAAP24Q9BTP7 215 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 RAB1BQ9H0U4 201 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 DPAGT1Q9H3H5 408 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 C12orf4Q9NQ89 552 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 NLKQ9UBE8 527 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 IL36RNQ9UBH0 155 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 AK3Q9UIJ7 227 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 ANKRD17O75179 2603 aaKnown RBP7.25□□□□□ -1.25
TRAF3-209ENST00000560463 ARID1AO14497 2285 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 DOPEY2Q9Y3R5 2298 aa7.25□□□□□ -1.25
TRAF3-209ENST00000560463 AKAP6Q13023 2319 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 CRYBG3Q68DQ2 2970 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 TRBV6-6A0A0A6YYG2 114 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 TRAV24A0A0B4J272 114 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 UBE2QL1A1L167 161 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 MEIS3P1A6NDR6 274 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 OR2AT4A6NND4 320 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 VGLL3A8MV65 326 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 ZNF736B4DX44 427 aaPredicted RBP7.24□□□□□ -1.25
TRAF3-209ENST00000560463 SLC33A1O00400 549 aaPredicted RBP7.24□□□□□ -1.25
TRAF3-209ENST00000560463 OR2H2O95918 312 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 HAND1O96004 215 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 NAPSAO96009 420 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 CD74P04233 296 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 CD3DP04234 171 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 MUC1P15941 1255 aaPredicted RBP7.24□□□□□ -1.25
TRAF3-209ENST00000560463 DUSP1P28562 367 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 RFX2P48378 723 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 TAS2R46P59540 309 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 TLE4Q04727 773 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 SRSF1Q07955 248 aaKnown RBP eCLIP7.24□□□□□ -1.25
TRAF3-209ENST00000560463 PDCD1Q15116 288 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 ZMYND11Q15326 602 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 MICBQ29980 383 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 PAN3Q58A45 887 aaKnown RBP7.24□□□□□ -1.25
TRAF3-209ENST00000560463 SPRNQ5BIV9 151 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms