RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 RGS19P49795 217 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 ZNF133P52736 654 aaPredicted RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 FAM3BP58499 235 aaPredicted RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 EWSR1Q01844 656 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 ACY1Q03154 408 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 EGR4Q05215 589 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 ZP4Q12836 540 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 FOXF1Q12946 379 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 ARFRP1Q13795 201 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 COTL1Q14019 142 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 FZD2Q14332 565 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM187Q14656 261 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM241Q24JQ0 296 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 POM121L1PQ3SYA9 428 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 SLC22A6Q4U2R8 563 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CST9Q5W186 159 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 ZNF343Q6P1L6 599 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CFAP161Q6P656 301 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 FIGLAQ6QHK4 219 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 KLHL24Q6TFL4 600 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM182Q6ZP80 229 aaPredicted RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CENPVQ7Z7K6 275 aaPredicted RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 H1FOOQ8IZA3 346 aaPredicted RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 MAML2Q8IZL2 1156 aaPredicted RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 LGI3Q8N145 548 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 BCORP1Q8N888 145 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CCDC71LQ8N9Z2 235 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 SLC26A10Q8NG04 563 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 OR52N4Q8NGI2 321 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 OR1N1Q8NGS0 311 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CLDND2Q8NHS1 167 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 FLVCR1-AS1Q8TAF5 88 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 SPPL3Q8TCT6 385 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 SSC4DQ8WTU2 575 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM170AQ8WVE7 144 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 MRPL24Q96A35 216 aaKnown RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 RERGQ96A58 199 aaPredicted RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 C18orf12Q96KH6 178 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 VKORC1Q9BQB6 163 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 SNHG12Q9BXW3 62 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 PCED1AQ9H1Q7 454 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 NAA60Q9H7X0 242 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 WFDC1Q9HC57 220 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CRLF2Q9HC73 371 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 GCM1Q9NP62 436 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 SLC2A4RGQ9NR83 387 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 FAM206AQ9NX38 181 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 P4HTMQ9NXG6 502 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 EHFQ9NZC4 300 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 AK3Q9UIJ7 227 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 RNF150Q9ULK6 438 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 MRPS18CQ9Y3D5 142 aaKnown RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 MYOFQ9NZM1 2061 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 AQP7P3A6NL99 342 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 C4orf47A7E2U8 309 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 ZNF727A8MUV8 499 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 H0YL77 283 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 H7C1C5 153 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 K7EQS6 105 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 P2RY10O00398 339 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 GEMIN2O14893 280 aaKnown RBP5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 SLC16A7O60669 478 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 IFNA1P01562 189 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 TTRP02766 147 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 TYMSP04818 313 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 CT45A8P0DMV1 189 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 CT45A9P0DMV2 189 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM225BP0DP42 221 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 ZNF20P17024 532 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 GLRA1P23415 457 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 DTYMKP23919 212 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 UCP1P25874 307 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 ATP6V0CP27449 155 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 PCP4P48539 62 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 DAP3P51398 398 aaKnown RBP5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 SNU13P55769 128 aaKnown RBP5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM50BP56557 158 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 LCN6P62502 163 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 ID2Q02363 134 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 FUT7Q11130 342 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 GNMTQ14749 295 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 ACKR1Q16570 336 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 CHRFAM7AQ494W8 412 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 CT45A2Q5DJT8 189 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 PLAC9Q5JTB6 97 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 SAPCD1Q5SSQ6 148 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 GFI1BQ5VTD9 330 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 FAM90A2PQ658T7 463 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 GLIPR1L1Q6UWM5 242 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 PLXDC2Q6UX71 529 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 FBXW12Q6X9E4 464 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 COX15Q7KZN9 410 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 C5orf24Q7Z6I8 188 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEFF1Q8IYR6 380 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 FAM185AQ8N0U4 392 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 OR5AS1Q8N127 324 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 CARFQ8N187 725 aa5.17□□□□□ -1.58
SNRPA1-209ENST00000560307 FBXL14Q8N1E6 418 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms