RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PPIAL4AQ9Y536 164 aa7.82□□□□□ -1.16
HERC1-206ENST00000559996 CENPEQ02224 2701 aa7.82□□□□□ -1.16
HERC1-206ENST00000559996 CSMD1Q96PZ7 3565 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 POLQO75417 2590 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 ABCA12Q86UK0 2595 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 HECTD1Q9ULT8 2610 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A10PA6NDY2 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A18PA6NE21 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A16PA6NEW6 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A20PA6NIJ5 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A8PA6NJQ4 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A7PA6NKC0 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A22PA8MWA6 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A12PA8MX19 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A5PA8MXJ8 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A23PA8MXZ1 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 SLC33A1O00400 549 aaPredicted RBP7.81□□□□□ -1.16
HERC1-206ENST00000559996 XRCC3O43542 346 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 GYPAP02724 150 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 CHRM2P08172 466 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 MELTFP08582 738 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A15PP0C7V4 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A13PP0C7W8 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A14PP0C7W9 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FAM90A24PP0C7X0 464 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 PTHLHP12272 177 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 SELLP14151 372 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 CHATP28329 748 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 ETV6P41212 452 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 SNU13P55769 128 aaKnown RBP7.81□□□□□ -1.16
HERC1-206ENST00000559996 ATP5J2P56134 94 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 BTG1P62324 171 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 SPIN3Q5JUX0 258 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 AVPI1Q5T686 147 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 OLFML2AQ68BL7 652 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 C1orf87Q8N0U7 546 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 LRRC75A-AS1Q8N1F1 130 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 FGFRL1Q8N441 504 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 OR4M1Q8NGD0 313 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 OR10R2Q8NGX6 335 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 C10orf105Q8TEF2 133 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 RAB40AQ8WXH6 277 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 AP3S1Q92572 193 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 NINJ1Q92982 152 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 PERPQ96FX8 193 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 SDSLQ96GA7 329 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 ABHD1Q96SE0 405 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 SDHCQ99643 169 aaPredicted RBP7.81□□□□□ -1.16
HERC1-206ENST00000559996 GAL3ST1Q99999 423 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 PECRQ9BY49 303 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 C6orf62Q9GZU0 229 aaPredicted RBP7.81□□□□□ -1.16
HERC1-206ENST00000559996 PCDHB16Q9NRJ7 776 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 CTSZQ9UBR2 303 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 HSF4Q9ULV5 492 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 PEX16Q9Y5Y5 336 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 V9GYH0 126 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 UNC79Q9P2D8 2635 aa7.81□□□□□ -1.16
HERC1-206ENST00000559996 PRRC2AP48634 2157 aaKnown RBP7.8□□□□□ -1.16
HERC1-206ENST00000559996 TRAV38-1A0A0B4J264 116 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 LRRC30A6NM36 301 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 F5H0A9 414 aaPredicted RBP7.8□□□□□ -1.16
HERC1-206ENST00000559996 MFNGO00587 321 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 SH2D1BO14796 132 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 HAND1O96004 215 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 WNT2P09544 360 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 IRF2P14316 349 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 GABRR1P24046 479 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 BLVRBP30043 206 aaPredicted RBP7.8□□□□□ -1.16
HERC1-206ENST00000559996 MNDAP41218 407 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 RANBP1P43487 201 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 PITPNBP48739 271 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 LMO4P61968 165 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 COL10A1Q03692 680 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 LSAMPQ13449 338 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 ZNF79Q15937 498 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 MICBQ29980 383 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 MPV17LQ2QL34 196 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 SMIM21Q3B7S5 101 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 CNIH2Q6PI25 160 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 LINC00299Q6ZSB3 139 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 C6orf201Q7Z4U5 140 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 LINC00596Q86U02 117 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 IZUMO1Q8IYV9 350 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 MFSD4AQ8N468 514 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 BPIFB2Q8N4F0 458 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 SUMF2Q8NBJ7 301 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 ZNRF1Q8ND25 227 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 OR4S1Q8NGB4 309 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 PLPPR1Q8TBJ4 325 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 ST8SIA4Q92187 359 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 ARHGAP5-AS1Q96IT6 56 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 CCL13Q99616 98 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 SULT4A1Q9BR01 284 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 NUDT16L1Q9BRJ7 211 aaKnown RBP7.8□□□□□ -1.16
HERC1-206ENST00000559996 URM1Q9BTM9 101 aaKnown RBP7.8□□□□□ -1.16
HERC1-206ENST00000559996 FAAP24Q9BTP7 215 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 BPESC1Q9GZL8 116 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 ATG5Q9H1Y0 275 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 ZMAT3Q9HA38 289 aaKnown RBP7.8□□□□□ -1.16
HERC1-206ENST00000559996 MYOZ1Q9NP98 299 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms