RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 IRF2P14316 349 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 ATAD3CQ5T2N8 411 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 FAAP24Q9BTP7 215 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 CACNG6Q9BXT2 260 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 KLK11Q9UBX7 282 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 CACNG2Q9Y698 323 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 AKAP6Q13023 2319 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 DOPEY2Q9Y3R5 2298 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 H7C417 338 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 IFNL4K9M1U5 179 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 SH2D1BO14796 132 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 DEGS1O15121 323 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 CYB5R3P00387 301 aaPredicted RBP10.24□□□□□ -0.77
HERC1-205ENST00000559886 SCN1BQ07699 218 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 BOLLQ8N9W6 283 aaKnown RBP10.24□□□□□ -0.77
HERC1-205ENST00000559886 NUDCD2Q8WVJ2 157 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 SULT4A1Q9BR01 284 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 SEBOXQ9HB31 216 aaPredicted RBP10.24□□□□□ -0.77
HERC1-205ENST00000559886 DCAF16Q9NXF7 216 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 MTFP1Q9UDX5 166 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 GLS2Q9UI32 602 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 CRYBG3Q68DQ2 2970 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 TRAV24A0A0B4J272 114 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 IGHV1-69-2A0A0G2JMI3 117 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 ISPDA4D126 451 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 SSX5O60225 188 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 OR2H2O95918 312 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 HAND1O96004 215 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 GNG2P59768 71 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 BRICD5Q6PL45 260 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 TMEM106BQ9NUM4 274 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 NLKQ9UBE8 527 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 RFPL4AA6NLU0 287 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 RFPL4AL1F8VTS6 287 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 TMEM178BH3BS89 294 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 RBBP9O75884 186 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 GLAP06280 429 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 PSG2P11465 335 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 ZNF44P15621 663 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 LMO1P25800 156 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 GDNFP39905 211 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 SSBP1Q04837 148 aaKnown RBP10.23□□□□□ -0.77
HERC1-205ENST00000559886 ARFRP1Q13795 201 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 FAM201AQ5SY85 155 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 C20orf204Q6ZNR8 217 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 C1orf87Q8N0U7 546 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 SUMF2Q8NBJ7 301 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 C19orf18Q8NEA5 215 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 NEU4Q8WWR8 484 aaPredicted RBP10.23□□□□□ -0.77
HERC1-205ENST00000559886 CCL17Q92583 94 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 DNAJB11Q9UBS4 358 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 OR14J1Q9UGF5 321 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 AK3Q9UIJ7 227 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 WIPI2Q9Y4P8 454 aa10.23□□□□□ -0.77
HERC1-205ENST00000559886 USF3Q68DE3 2245 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 OR2AT4A6NND4 320 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 SLC33A1O00400 549 aaPredicted RBP10.22□□□□□ -0.77
HERC1-205ENST00000559886 CD80P33681 288 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 TEX36Q5VZQ5 186 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 SFRP4Q6FHJ7 346 aaPredicted RBP10.22□□□□□ -0.77
HERC1-205ENST00000559886 TRAPPC6BQ86SZ2 158 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 ZNF295-AS1Q8N0V1 137 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 OR5T2Q8NGG2 359 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 IGFBPL1Q8WX77 278 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 IGKV1D-17A0A075B6S4 117 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 UBE2QL1A1L167 161 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 MEIS3P1A6NDR6 274 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 MCRIP1C9JLW8 97 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 MUC1P15941 1255 aaPredicted RBP10.22□□□□□ -0.77
HERC1-205ENST00000559886 INPP1P49441 399 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 CEBPDP49716 269 aaPredicted RBP10.22□□□□□ -0.77
HERC1-205ENST00000559886 MICBQ29980 383 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 HFEQ30201 348 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 CD177Q8N6Q3 437 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 RDH5Q92781 318 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 OCSTAMPQ9BR26 566 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 DPCDQ9BVM2 203 aaPredicted RBP10.22□□□□□ -0.77
HERC1-205ENST00000559886 TBC1D24Q9ULP9 559 aa10.22□□□□□ -0.77
HERC1-205ENST00000559886 IGHV3OR15-7A0A075B7D8 119 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 OOEPA6NGQ2 149 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 OVOL3O00110 214 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 SIRPB1O00241 398 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 PRDX2P32119 198 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 ACTBP60709 375 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 ACTG1P63261 375 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 MRPS11P82912 194 aaKnown RBP10.21□□□□□ -0.77
HERC1-205ENST00000559886 RBM39Q14498 530 aaKnown RBP10.21□□□□□ -0.77
HERC1-205ENST00000559886 ZNF57Q68EA5 555 aaPredicted RBP10.21□□□□□ -0.77
HERC1-205ENST00000559886 DCDC5Q6ZRR9 648 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 TOMM5Q8N4H5 51 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 ANGPTL6Q8NI99 470 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 PSMG3-AS1Q96PY0 264 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 CMSS1Q9BQ75 279 aaKnown RBP10.21□□□□□ -0.77
HERC1-205ENST00000559886 ZNF222Q9UK12 451 aa10.21□□□□□ -0.77
HERC1-205ENST00000559886 ANKRD20A5PA0PJZ0 165 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 HSPB6O14558 160 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 PLA2G10O15496 165 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 ZNF205O95201 554 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 GSTT2BP0CG30 244 aa10.21□□□□□ -0.78
HERC1-205ENST00000559886 COL8A2P25067 703 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms