RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 FAM96BQ9Y3D0 163 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 RYR3Q15413 4870 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 OR2AT4A6NND4 320 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 MYL12BO14950 172 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 SELENOFO60613 162 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 ENTPD6O75354 484 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 UPK1BO75841 260 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 GLCEO94923 617 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 PTTG1O95997 202 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 IL1AP01583 271 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 IGLV3-1P01715 115 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 CSF1P09603 554 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 PSG2P11465 335 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 CPEP16870 476 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 SLC2A5P22732 501 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 CFL1P23528 166 aaKnown RBP4.69□□□□□ -1.66
USP3-215ENST00000559771 GADD45AP24522 165 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 PTBP1P26599 531 aaKnown RBP eCLIP4.69□□□□□ -1.66
USP3-215ENST00000559771 POU1F1P28069 291 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 GABRA5P31644 462 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 GRK5P34947 590 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 NAA10P41227 235 aaPredicted RBP4.69□□□□□ -1.66
USP3-215ENST00000559771 RORCP51449 518 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 BCAP31P51572 246 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 HCCSP53701 268 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 DEFA1P59665 94 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 DEFA3P59666 94 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 BDH1Q02338 343 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 ZNF91Q05481 1191 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 TPBGQ13641 420 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 GINS1Q14691 196 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 MED22Q15528 200 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 SNAPC1Q16533 368 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 LY6EQ16553 131 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 GFOD2Q3B7J2 385 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 LRRC10Q5BKY1 277 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 SPANXN2Q5MJ10 180 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 CCBE1Q6UXH8 406 aaPredicted RBP4.69□□□□□ -1.66
USP3-215ENST00000559771 PLEKHG7Q6ZR37 379 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 GID4Q8IVV7 300 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 MKXQ8IYA7 352 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 CD177Q8N6Q3 437 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 CSNK2A3Q8NEV1 391 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 OR2T33Q8NG76 320 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 OR8B12Q8NGG6 310 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 OR52H1Q8NGJ2 320 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 OR6N2Q8NGY6 317 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 OR5R1Q8NH85 324 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 OTOSQ8NHW6 89 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 SETD6Q8TBK2 473 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 AQP3Q92482 292 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 H1FXQ92522 213 aaKnown RBP4.69□□□□□ -1.66
USP3-215ENST00000559771 PIGCQ92535 297 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 AP3S1Q92572 193 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 PPP1R14AQ96A00 147 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 SDSLQ96GA7 329 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 RNF170Q96K19 258 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 IL4I1Q96RQ9 567 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 INTS14Q96SY0 518 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 SSX3Q99909 188 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 PAPOLGQ9BWT3 736 aaKnown RBP4.69□□□□□ -1.66
USP3-215ENST00000559771 OR10A2Q9H208 303 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 RGCCQ9H4X1 137 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 METTL8Q9H825 291 aaKnown RBP4.69□□□□□ -1.66
USP3-215ENST00000559771 ZNF702PQ9H963 129 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 INPP5EQ9NRR6 644 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 SERTAD4Q9NUC0 356 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 FAM206AQ9NX38 181 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 NLKQ9UBE8 527 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 STUB1Q9UNE7 303 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 SSR3Q9UNL2 185 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 GSTK1Q9Y2Q3 226 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 ZNF281Q9Y2X9 895 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 MPC1Q9Y5U8 109 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 NBEAL2Q6ZNJ1 2754 aa4.69□□□□□ -1.66
USP3-215ENST00000559771 DSCAML1Q8TD84 2053 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 FUOMA2VDF0 154 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 FAM90A8PA6NJQ4 464 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 TMEM210A6NLX4 147 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 ZNF670-ZNF695F2Z2N8 137 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 PRKYO43930 277 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 TMEM127O75204 238 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 MTRF1O75570 445 aaKnown RBP4.68□□□□□ -1.66
USP3-215ENST00000559771 APOA1P02647 267 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 HNRNPCP07910 306 aaKnown RBP eCLIP4.68□□□□□ -1.661e-7■■■□□ 18.6
USP3-215ENST00000559771 HSMCR30P0CW71 290 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 NDUFB7P17568 137 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 HSD11B1P28845 292 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 HTR1FP30939 366 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 FGF9P31371 208 aaPredicted RBP4.68□□□□□ -1.66
USP3-215ENST00000559771 GNALP38405 381 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 GPM6AP51674 278 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 BLVRAP53004 296 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 DLX6P56179 175 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 WNT4P56705 351 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 HABP2Q14520 560 aaPredicted RBP4.68□□□□□ -1.66
USP3-215ENST00000559771 TRAM1Q15629 374 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 CEACAM21Q3KPI0 293 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 NXNL2Q5VZ03 156 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 TMEM236Q5W0B7 351 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms