RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 KCNE4Q8WWG9 221 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 ADGRG7Q96K78 797 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 SPACA1Q9HBV2 294 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 P4HTMQ9NXG6 502 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 PILRBQ9UKJ0 227 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 MED19A0JLT2 244 aaPredicted RBP14.31□□□□□ -0.12
SPG11-215ENST00000559193 C7orf77A4D0Y5 90 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 PPYP01298 95 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 SNRNP70P08621 437 aaKnown RBP14.31□□□□□ -0.12
SPG11-215ENST00000559193 PTAFRP25105 342 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 IGSF11Q5DX21 431 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 TMEM211Q6ICI0 200 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 CCDC71LQ8N9Z2 235 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 IP6K3Q96PC2 410 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 EIF5A2Q9GZV4 153 aaKnown RBP14.31□□□□□ -0.12
SPG11-215ENST00000559193 C11orf1Q9H5F2 150 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 ZNF442Q9H7R0 627 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 TMED3Q9Y3Q3 217 aa14.31□□□□□ -0.12
SPG11-215ENST00000559193 ZNF816-ZNF321PA0A0X1KG74 233 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 NPBWR2P48146 333 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 ZNF611Q8N823 705 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 OR10D3Q8NH80 312 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 BOD1Q96IK1 185 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 GPR35Q9HC97 309 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 STRAPQ9Y3F4 350 aaKnown RBP14.3□□□□□ -0.12
SPG11-215ENST00000559193 NCKAP5O14513 1909 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 SHANK1Q9Y566 2161 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 LRRC3CA6NJW4 275 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 OR7C1O76099 320 aaPredicted RBP14.3□□□□□ -0.12
SPG11-215ENST00000559193 PRH1P02810 166 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 FUT3P21217 361 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 ASCL1P50553 236 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 CLDN15P56746 228 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 EWSR1Q01844 656 aaKnown RBP eCLIP14.3□□□□□ -0.12
SPG11-215ENST00000559193 TGIF1Q15583 401 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 TRIM61Q5EBN2 209 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 PMS2CLQ68D20 193 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 KDF1Q8NAX2 398 aaPredicted RBP14.3□□□□□ -0.12
SPG11-215ENST00000559193 OR2V1Q8NHB1 315 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 SGCZQ96LD1 299 aa14.3□□□□□ -0.12
SPG11-215ENST00000559193 USB1Q9BQ65 265 aaKnown RBP14.3□□□□□ -0.12
SPG11-215ENST00000559193 C3orf85A0A1B0GTC6 90 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 NKX2-6A6NCS4 301 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 EIF3GO75821 320 aaKnown RBP eCLIP14.29□□□□□ -0.12
SPG11-215ENST00000559193 P04436 131 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 ZNF44P15621 663 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 FOLR3P41439 243 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 RAB5CP51148 216 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 SNRPEP62304 92 aaKnown RBP14.29□□□□□ -0.12
SPG11-215ENST00000559193 SLC25A26Q70HW3 274 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 C20orf24Q9BUV8 137 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 K7N7A8 449 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 NTN3O00634 580 aaPredicted RBP14.29□□□□□ -0.12
SPG11-215ENST00000559193 MPPED1O15442 326 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 MMP7P09237 267 aaPredicted RBP14.29□□□□□ -0.12
SPG11-215ENST00000559193 PPP1CCP36873 323 aaKnown RBP14.29□□□□□ -0.12
SPG11-215ENST00000559193 PCBD1P61457 104 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 WIPI1Q5MNZ9 446 aaPredicted RBP14.29□□□□□ -0.12
SPG11-215ENST00000559193 RIPPLY2Q5TAB7 128 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 TMEM182Q6ZP80 229 aaPredicted RBP14.29□□□□□ -0.12
SPG11-215ENST00000559193 C5orf24Q7Z6I8 188 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 ISOC2Q96AB3 205 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 SIT1Q9Y3P8 196 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 C1orf196B1AJZ1 125 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 M0R036 132 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 ACAA1P09110 424 aaPredicted RBP14.29□□□□□ -0.12
SPG11-215ENST00000559193 DAOP14920 347 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 GNRHRP30968 328 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 PMELP40967 661 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 Q0VFX4 171 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 SPSB4Q96A44 273 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 TMEM222Q9H0R3 208 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 PARPBPQ9NWS1 579 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 FBXO7Q9Y3I1 522 aa14.29□□□□□ -0.12
SPG11-215ENST00000559193 A6NLC8 198 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 TRDCB7Z8K6 153 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 UMAD1C9J7I0 102 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 MT-ND4LP03901 98 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 CFIP05156 583 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 ZFP36L1Q07352 338 aaKnown RBP14.28□□□□□ -0.12
SPG11-215ENST00000559193 GNMTQ14749 295 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 RNF212Q495C1 297 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 CPEB3Q8NE35 698 aaKnown RBP14.28□□□□□ -0.12
SPG11-215ENST00000559193 ABHD3Q8WU67 409 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 TECTBQ96PL2 329 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 RFNGQ9Y644 331 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 TNRC6BQ9UPQ9 1833 aaKnown RBP14.28□□□□□ -0.12
SPG11-215ENST00000559193 A0A1B0GV50 99 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 A0A1W2PPH5 198 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 IGSF23A1L1A6 192 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 FAM24AA6NFZ4 105 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 CDS2O95674 445 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 RPS18P62269 152 aaKnown RBP14.28□□□□□ -0.12
SPG11-215ENST00000559193 SLC23A3Q6PIS1 610 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 OR2C3Q8N628 320 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 SUMF1Q8NBK3 374 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 FAM213BQ8TBF2 198 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 EXTL1Q92935 676 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 ZNF845Q96IR2 970 aaPredicted RBP14.28□□□□□ -0.12
SPG11-215ENST00000559193 C1QTNF5Q9BXJ0 243 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms