RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 ARF6P62330 175 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 PAX2Q02962 417 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 PAX8Q06710 450 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 UBE2V2Q15819 145 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 IGSF11Q5DX21 431 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 FAM76BQ5HYJ3 339 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 RUSC1-AS1Q66K80 236 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 GLDNQ6ZMI3 551 aaPredicted RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 SLC36A1Q7Z2H8 476 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 TMEM185AQ8NFB2 350 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 OR10Z1Q8NGY1 313 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 ZNF418Q8TF45 676 aaPredicted RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 RFT1Q96AA3 541 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 ADAT3Q96EY9 351 aaPredicted RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 SPACA5Q96QH8 159 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 C11orf54Q9H0W9 315 aaPredicted RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 ONECUT1Q9UBC0 465 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 SLC7A11Q9UPY5 501 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 DSCAML1Q8TD84 2053 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 PPIAL4CA0A0B4J2A2 164 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 KIR2DS1A0A191URI9 304 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 MDFIC2A0A1B0GVS7 189 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 PQLC2LA1A4F0 135 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 MEX3AA1L020 520 aaKnown RBP7.98□□□□□ -1.13
SPG11-214ENST00000558989 OR2AT4A6NND4 320 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 NDUFA2O43678 99 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 ENSAO43768 121 aaKnown RBP7.98□□□□□ -1.13
SPG11-214ENST00000558989 NXPH2O95156 264 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 OCM2P0CE71 109 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 OCMP0CE72 109 aaPredicted RBP7.98□□□□□ -1.13
SPG11-214ENST00000558989 UBCP0CG48 685 aaKnown RBP7.98□□□□□ -1.13
SPG11-214ENST00000558989 STAG3L3P0CL85 134 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 CCL1P22362 96 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 POU3F4P49335 361 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 ACTA2P62736 377 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 ACTG2P63267 376 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 CD69Q07108 199 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 RAB40BQ12829 278 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 ALKBH1Q13686 389 aaKnown RBP7.98□□□□□ -1.13
SPG11-214ENST00000558989 DGUOKQ16854 277 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 KLHL22Q53GT1 634 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 OGFRL1Q5TC84 451 aaPredicted RBP7.98□□□□□ -1.13
SPG11-214ENST00000558989 OR2G6Q5TZ20 316 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 TTC23Q5W5X9 447 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 STUMQ69YW2 141 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 KCTD20Q7Z5Y7 419 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 SIGLECL1Q8N7X8 197 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 ZNRF1Q8ND25 227 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 TSPAN14Q8NG11 270 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 OR13C3Q8NGS6 347 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 BORCS8Q96FH0 119 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 RDH12Q96NR8 316 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 GAFA1Q96PS6 74 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 C19orf24Q9BVV8 132 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 TNFRSF19Q9NS68 423 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 NUP50Q9UKX7 468 aa7.98□□□□□ -1.13
SPG11-214ENST00000558989 MRPS7Q9Y2R9 242 aaKnown RBP7.98□□□□□ -1.13
SPG11-214ENST00000558989 IGKV1D-17A0A075B6S4 117 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 IGKV1-27A0A075B6S5 117 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 A0A1W2PRD5 423 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 A0A1W2PRF3 423 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 A0A1W2PRM7 423 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 RFPL4AA6NLU0 287 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 ZNF879B4DU55 563 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 RFPL4AL1F8VTS6 287 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 J3QT63 122 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 SSX5O60225 188 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 TOX4O94842 621 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 FSTL3O95633 263 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 SERPINA3P01011 423 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 PSG2P11465 335 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 ADARB1P78563 741 aaKnown RBP7.97□□□□□ -1.13
SPG11-214ENST00000558989 PDZK1IP1Q13113 114 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 LRRC10Q5BKY1 277 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 TMEM244Q5VVB8 128 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 CD276Q5ZPR3 534 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 TMEM42Q69YG0 159 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 XAF1Q6GPH4 301 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 ACP7Q6ZNF0 438 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 RNF144BQ7Z419 303 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 TEX29Q8N6K0 151 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.97□□□□□ -1.13
SPG11-214ENST00000558989 OR13C9Q8NGT0 318 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 ANGPTL6Q8NI99 470 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 TSEN15Q8WW01 171 aaKnown RBP7.97□□□□□ -1.13
SPG11-214ENST00000558989 MRPL48Q96GC5 212 aaKnown RBP7.97□□□□□ -1.13
SPG11-214ENST00000558989 PDCD1LG2Q9BQ51 273 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 SIRT7Q9NRC8 400 aa7.97□□□□□ -1.13
SPG11-214ENST00000558989 PNMA8CA0A1B0GUJ8 204 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 FAM90A8PA6NJQ4 464 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 HSBP1L1C9JCN9 74 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 F8VVB4 439 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 F8VWA3 439 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 XPNPEP2O43895 674 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 GATBO75879 557 aaKnown RBP7.96□□□□□ -1.13
SPG11-214ENST00000558989 IGHA1P01876 353 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 FAM90A13PP0C7W8 464 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 FAM90A24PP0C7X0 464 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 ZNF735P0CB33 412 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 LIMS3P0CW19 117 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms