RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	RFPL4AL1	F8VTS6	287 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787		H3BUX3	64 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787		M0QZ24	198 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ANGPTL7	O43827	346 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF254	O75437	659 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	SULT1C4	O75897	302 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	CLPX	O76031	633 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	INMT	O95050	263 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	APOL3	O95236	402 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	PAH	P00439	452 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	TTR	P02766	147 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	KRT8	P05787	483 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	C21orf33	P30042	268 aa	Predicted RBP	5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ETV1	P50549	477 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	UBE2E1	P51965	193 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	CAPZA1	P52907	286 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	TAS2R43	P59537	309 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	GNG3	P63215	75 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ROM1	Q03395	351 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	RIPPLY1	Q0D2K3	151 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	IRF3	Q14653	427 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	TMEM200B	Q69YZ2	307 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	DHRS7B	Q6IAN0	325 aa	Predicted RBP	5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	SLC35E4	Q6ICL7	350 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF322	Q6U7Q0	402 aa	Predicted RBP	5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	METAP1D	Q6UB28	335 aa	Predicted RBP	5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ACP7	Q6ZNF0	438 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	C1orf122	Q6ZSJ8	110 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF367	Q7RTV3	350 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	FAM220A	Q7Z4H9	259 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ANGPTL5	Q86XS5	388 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	MKX	Q8IYA7	352 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF679	Q8IYX0	411 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	SPART	Q8N0X7	666 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	SYS1	Q8N2H4	156 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	NANOGP1	Q8N7R0	232 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	C11orf44	Q8N8P7	122 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	OR4M1	Q8NGD0	313 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	OR5A2	Q8NGI9	324 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	OR52N1	Q8NH53	320 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	C8orf46	Q8TAG6	207 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	OR8B4	Q96RC9	309 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ALG8	Q9BVK2	526 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	MRO	Q9BYG7	248 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	DNTTIP1	Q9H147	329 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	GPR173	Q9NS66	373 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF222	Q9UK12	451 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787	VPREB3	Q9UKI3	123 aa		5.69	□□□□□ -1.5
MARK3-215	ENST00000558787		A0A1B0GTI1	187 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	BTBD17	A6NE02	478 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ANKRD61	A6NGH8	418 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ACOD1	A6NK06	481 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787		F8VVB4	439 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787		F8VWA3	439 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787		M0R1W7	72 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	SRSF10	O75494	262 aa	Known RBP	5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	MTRF1	O75570	445 aa	Known RBP	5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	RPP14	O95059	124 aa	Known RBP	5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	NRAS	P01111	189 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	IGLV3-1	P01715	115 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	HTR1A	P08908	422 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	LIMS3	P0CW19	117 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	LIMS4	P0CW20	117 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ATP6V1B1	P15313	513 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	CCL3L1	P16619	93 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	COX7A1	P24310	79 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	PRDX2	P32119	198 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	HAAO	P46952	286 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	RAB13	P51153	203 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	RIDA	P52758	137 aa	Known RBP	5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	CAV3	P56539	151 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	WNT4	P56705	351 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	RPL11	P62913	178 aa	Known RBP	5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	BDH1	Q02338	343 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF85	Q03923	595 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	EMX1	Q04741	257 aa	Predicted RBP	5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	BLMH	Q13867	455 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ODF4	Q2M2E3	257 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	CCDC58	Q4VC31	144 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	PLA1A	Q53H76	456 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF684	Q5T5D7	378 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	UBE2U	Q5VVX9	321 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	GDPGP1	Q6ZNW5	385 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	KRT74	Q7RTS7	529 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	SSX6	Q7RTT6	188 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	LHFPL3	Q86UP9	236 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	C11orf42	Q8N5U0	333 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF671	Q8TAW3	534 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	NPRL2	Q8WTW4	380 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	SGCD	Q92629	289 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	SDSL	Q96GA7	329 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	C4orf36	Q96KX1	117 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	TBX5	Q99593	518 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	SSX3	Q99909	188 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	C16orf95	Q9H693	158 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	METTL8	Q9H825	291 aa	Known RBP	5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ABCB9	Q9NP78	766 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ISYNA1	Q9NPH2	558 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ACOT13	Q9NPJ3	140 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	BABAM2	Q9NXR7	383 aa		5.68	□□□□□ -1.5

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