RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CDKN1AP38936 164 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 MDH2P40926 338 aaKnown RBP12.48□□□□□ -0.41
VPS18-202ENST00000558474 CBX5P45973 191 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 TMEM33P57088 247 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 BATF2Q8N1L9 274 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 Q8N402 240 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 ANGPTL6Q8NI99 470 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 PPP1R35Q8TAP8 253 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 SMIM4Q8WVI0 70 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 FCAMRQ8WWV6 532 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 ARHGAP5-AS1Q96IT6 56 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 RIMS4Q9H426 269 aaPredicted RBP12.48□□□□□ -0.41
VPS18-202ENST00000558474 IL36RNQ9UBH0 155 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 LRRK2Q5S007 2527 aa12.48□□□□□ -0.41
VPS18-202ENST00000558474 RFPL4AA6NLU0 287 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 RFPL4AL1F8VTS6 287 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 H7C1Q1 480 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 LPLP06858 475 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 ZNF44P15621 663 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 GNB3P16520 340 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 COL8A2P25067 703 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 PRDX2P32119 198 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 PAX5Q02548 391 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 ATAD3CQ5T2N8 411 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 STUMQ69YW2 141 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 ZNF787Q6DD87 383 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 IZUMO1Q8IYV9 350 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 MUC20Q8N307 709 aaPredicted RBP12.47□□□□□ -0.41
VPS18-202ENST00000558474 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 YIPF5Q969M3 257 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 SDSLQ96GA7 329 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 ZNF107Q9UII5 783 aaPredicted RBP12.47□□□□□ -0.41
VPS18-202ENST00000558474 ZNF222Q9UK12 451 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 KCNK7Q9Y2U2 307 aa12.47□□□□□ -0.41
VPS18-202ENST00000558474 IGKV1D-17A0A075B6S4 117 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 TRAV24A0A0B4J272 114 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 SLC33A1O00400 549 aaPredicted RBP12.46□□□□□ -0.41
VPS18-202ENST00000558474 CSN2P05814 226 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 CD80P33681 288 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 SNU13P55769 128 aaKnown RBP12.46□□□□□ -0.41
VPS18-202ENST00000558474 GNG2P59768 71 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 BTG1P62324 171 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 SRSF7Q16629 238 aaKnown RBP eCLIP12.46□□□□□ -0.41
VPS18-202ENST00000558474 NKAPLQ5M9Q1 402 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 C6orf201Q7Z4U5 140 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 SNX29P2Q8IUI4 249 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 BOLLQ8N9W6 283 aaKnown RBP12.46□□□□□ -0.41
VPS18-202ENST00000558474 SUMF2Q8NBJ7 301 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 GPX8Q8TED1 209 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 DEDD2Q8WXF8 326 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 RAB1CQ92928 201 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 MED30Q96HR3 178 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 SNX22Q96L94 193 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.41
VPS18-202ENST00000558474 DPCDQ9BVM2 203 aaPredicted RBP12.46□□□□□ -0.41
VPS18-202ENST00000558474 CHST6Q9GZX3 395 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 FAM234AQ9H0X4 552 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 ZNF665Q9H7R5 613 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 TAS2R8Q9NYW2 309 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 KAAG1Q9UBP8 84 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 OR14J1Q9UGF5 321 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 CACNG2Q9Y698 323 aa12.46□□□□□ -0.41
VPS18-202ENST00000558474 TMEM235A6NFC5 223 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 NKX6-3A6NJ46 265 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 TNFRSF13BO14836 293 aaPredicted RBP12.45□□□□□ -0.42
VPS18-202ENST00000558474 CD3GP09693 182 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 CSF3P09919 207 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 DTYMKP23919 212 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 DUSP1P28562 367 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 ACTBP60709 375 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 GMFBP60983 142 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 ACTG1P63261 375 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 MRPS15P82914 257 aaKnown RBP12.45□□□□□ -0.42
VPS18-202ENST00000558474 ARFRP1Q13795 201 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 TMEM155Q4W5P6 130 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 PAN3Q58A45 887 aaKnown RBP12.45□□□□□ -0.42
VPS18-202ENST00000558474 ZNF788Q6ZQV5 615 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 SLC36A1Q7Z2H8 476 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 TGIF2LYQ8IUE0 185 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 DTX3Q8N9I9 347 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 OR5D13Q8NGL4 314 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 ZFAND2BQ8WV99 257 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 SEH1LQ96EE3 360 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 SULT4A1Q9BR01 284 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 OCSTAMPQ9BR26 566 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 THAP7Q9BT49 309 aaPredicted RBP12.45□□□□□ -0.42
VPS18-202ENST00000558474 GSX2Q9BZM3 304 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 MTFP1Q9UDX5 166 aa12.45□□□□□ -0.42
VPS18-202ENST00000558474 RBMX2Q9Y388 322 aaKnown RBP12.45□□□□□ -0.42
VPS18-202ENST00000558474 TRBV6-6A0A0A6YYG2 114 aa12.44□□□□□ -0.42
VPS18-202ENST00000558474 J3QRK9 145 aa12.44□□□□□ -0.42
VPS18-202ENST00000558474 ZNF737O75373 536 aa12.44□□□□□ -0.42
VPS18-202ENST00000558474 UPK1BO75841 260 aa12.44□□□□□ -0.42
VPS18-202ENST00000558474 RBBP9O75884 186 aa12.44□□□□□ -0.42
VPS18-202ENST00000558474 ECDO95905 644 aaPredicted RBP12.44□□□□□ -0.42
VPS18-202ENST00000558474 IGHV2-70P01814 119 aa12.44□□□□□ -0.42
VPS18-202ENST00000558474 GSTT2BP0CG30 244 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms