RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ARG1P05089 322 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 MELTFP08582 738 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 SURF2Q15527 256 aaPredicted RBP13.47□□□□□ -0.25
AP4E1-202ENST00000558439 IGSF11Q5DX21 431 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 GCNT2Q8N0V5 402 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 M1APQ8TC57 530 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 CT55Q8WUE5 264 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 DUSP13Q9UII6 198 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 CEBPZOSA8MTT3 80 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 PRF1P14222 555 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 CALCRP30988 508 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 ALDH3B1P43353 468 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 SNRPEP62304 92 aaKnown RBP13.47□□□□□ -0.25
AP4E1-202ENST00000558439 EDDM3AQ14507 147 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 HMGN3Q15651 99 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 FAM24BQ8N5W8 94 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 ZNF488Q96MN9 340 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 NIPSNAP3BQ9BS92 247 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 GPR35Q9HC97 309 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 A0A0A6YYD4 124 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 FCGR3AP08637 254 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 GABRA2P47869 451 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 DVL1P1P54792 670 aaPredicted RBP13.47□□□□□ -0.25
AP4E1-202ENST00000558439 MLF1P58340 268 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 TLE4Q04727 773 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 MYO7BQ6PIF6 2116 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 C17orf82Q86X59 251 aaPredicted RBP13.47□□□□□ -0.25
AP4E1-202ENST00000558439 SKA3Q8IX90 412 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 OR2C3Q8N628 320 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 NIT2Q9NQR4 276 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
AP4E1-202ENST00000558439 OR2C1O95371 312 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 PPYP01298 95 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 PDZD11Q5EBL8 140 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 DHRS13Q6UX07 377 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 LIAT1Q6ZQX7 453 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 UBALD2Q8IYN6 164 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 APOBEC3DQ96AK3 386 aaPredicted RBP13.46□□□□□ -0.25
AP4E1-202ENST00000558439 ANGPTL4Q9BY76 406 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 MMP24Q9Y5R2 645 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 NKX2-6A6NCS4 301 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 NPIPB13A6NJU9 1138 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 NPIPB4C9JG80 1138 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 G3V3Q6 166 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 IFNA1P01562 189 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 RFPL3SP0C7P2 107 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 GCH1P30793 250 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 NDUFA6P56556 154 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 ENDOGQ14249 297 aaKnown RBP13.46□□□□□ -0.25
AP4E1-202ENST00000558439 PRDM6Q9NQX0 595 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 A0A0C4DFX4 3053 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 BCL3P20749 454 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 ACKR3P25106 362 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 STARD6P59095 220 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 C17orf78Q8N4C9 275 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 OR10AD1Q8NGE0 317 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 SAT2Q96F10 170 aaPredicted RBP13.46□□□□□ -0.25
AP4E1-202ENST00000558439 WDR54Q9H977 334 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 SLC7A10Q9NS82 523 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 MED9Q9NWA0 146 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 TMED3Q9Y3Q3 217 aa13.46□□□□□ -0.25
AP4E1-202ENST00000558439 C2orf16Q68DN1 1984 aa13.46□□□□□ -0.26
AP4E1-202ENST00000558439 NBASA2RRP1 2371 aa13.46□□□□□ -0.26
AP4E1-202ENST00000558439 CST2P09228 141 aa13.46□□□□□ -0.26
AP4E1-202ENST00000558439 MAGEA5P43359 124 aa13.46□□□□□ -0.26
AP4E1-202ENST00000558439 LPAR6P43657 344 aa13.46□□□□□ -0.26
AP4E1-202ENST00000558439 PMS2CLQ68D20 193 aa13.46□□□□□ -0.26
AP4E1-202ENST00000558439 DEFB123Q8N688 67 aa13.46□□□□□ -0.26
AP4E1-202ENST00000558439 LHX6Q9UPM6 363 aa13.46□□□□□ -0.26
AP4E1-202ENST00000558439 OR6C65A6NJZ3 312 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 H0YIZ8 118 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 SERPINA7P05543 415 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 CRYBA1P05813 215 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 KCNJ3P48549 501 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 TBC1D26Q86UD7 250 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 LDLRAD3Q86YD5 345 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 ZNF573Q86YE8 665 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 SF3B5Q9BWJ5 86 aaKnown RBP13.45□□□□□ -0.26
AP4E1-202ENST00000558439 CCL28Q9NRJ3 127 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 KIAA2026Q5HYC2 2103 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 PCDH15Q96QU1 1955 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 ACTL6AO96019 429 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 RD3LP0DJH9 198 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 TRA2AQ13595 282 aaKnown RBP eCLIP13.45□□□□□ -0.26
AP4E1-202ENST00000558439 GAPTQ8N292 157 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 SLC35G3Q8N808 338 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 NRIP2Q9BQI9 281 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 PLEKHF2Q9H8W4 249 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 SLC39A9Q9NUM3 307 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 MPPED1O15442 326 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 TNFSF15O95150 251 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 IL2RAP01589 272 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 COX6A1P12074 109 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 FHITP49789 147 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 FAM173AQ9BQD7 235 aa13.45□□□□□ -0.26
AP4E1-202ENST00000558439 DIDO1Q9BTC0 2240 aaKnown RBP13.45□□□□□ -0.26
AP4E1-202ENST00000558439 A0A0U1RQK1 487 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 TIMM8AO60220 97 aaPredicted RBP13.44□□□□□ -0.26
AP4E1-202ENST00000558439 FABP6P51161 128 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 KIAA0141Q14154 515 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms