RNA–Protein interactions for RNA: ENST00000558005.1

CRTC3-203, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-203ENST00000558005 CADM1Q9BY67 442 aaKnown RBP9.47□□□□□ -0.89
CRTC3-203ENST00000558005 DCLRE1BQ9H816 532 aa9.47□□□□□ -0.89
CRTC3-203ENST00000558005 SLC25A19Q9HC21 320 aa9.47□□□□□ -0.89
CRTC3-203ENST00000558005 EXOSC4Q9NPD3 245 aaKnown RBP9.47□□□□□ -0.89
CRTC3-203ENST00000558005 MTCH1Q9NZJ7 389 aa9.47□□□□□ -0.89
CRTC3-203ENST00000558005 ZNF729A6NN14 1252 aaPredicted RBP9.46□□□□□ -0.9
CRTC3-203ENST00000558005 ZNF670-ZNF695F2Z2N8 137 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 GNGT2O14610 69 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 SYT7O43581 403 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 KRT8P05787 483 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 LYL1P12980 280 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 ANXA8P13928 327 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 JUNBP17275 347 aaPredicted RBP9.46□□□□□ -0.9
CRTC3-203ENST00000558005 ATP1B3P54709 279 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 CDK5Q00535 292 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 MFGE8Q08431 387 aaPredicted RBP9.46□□□□□ -0.9
CRTC3-203ENST00000558005 MADCAM1Q13477 382 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 DMRTC1Q5HYR2 192 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 CASC10Q5T4H9 136 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 PRAMEF5Q5TYX0 476 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 DEFB107AQ8IZN7 70 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 TRMT10AQ8TBZ6 339 aaKnown RBP9.46□□□□□ -0.9
CRTC3-203ENST00000558005 HAVCR2Q8TDQ0 301 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 SPSB1Q96BD6 273 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 LRGUKQ96M69 825 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 CHST6Q9GZX3 395 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 MED4Q9NPJ6 270 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.9
CRTC3-203ENST00000558005 SMAD5-AS1Q9Y6J3 95 aa9.46□□□□□ -0.9
CRTC3-203ENST00000558005 ODAMA1E959 279 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 SEC14L6B5MCN3 397 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 CST1P01037 141 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 IGHG2P01859 326 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 IGHA1P01876 353 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 ELANEP08246 267 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 SNRNP70P08621 437 aaKnown RBP9.45□□□□□ -0.9
CRTC3-203ENST00000558005 OCM2P0CE71 109 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 OCMP0CE72 109 aaPredicted RBP9.45□□□□□ -0.9
CRTC3-203ENST00000558005 UBCP0CG48 685 aaKnown RBP9.45□□□□□ -0.9
CRTC3-203ENST00000558005 OR5H8P0DN80 308 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 TMEM11P17152 192 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 ATP6V1B2P21281 511 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 CD24P25063 80 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 ECI1P42126 302 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 OR3A1P47881 315 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 FOXE3Q13461 319 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 HES1Q14469 280 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 KIR2DS1Q14954 304 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 SLC16A12Q6ZSM3 486 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 LHFPL2Q6ZUX7 228 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 ZNF329Q86UD4 541 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 DRAM1Q8N682 238 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 C5orf56Q8N8D9 126 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 ZNF565Q8N9K5 539 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 CLN6Q9NWW5 311 aa9.45□□□□□ -0.9
CRTC3-203ENST00000558005 H2AFY2Q9P0M6 372 aaPredicted RBP9.45□□□□□ -0.9
CRTC3-203ENST00000558005 LCE6AA0A183 80 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 A0A1B0GTI1 187 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 TCRBV5S2A0A599 114 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 MEX3AA1L020 520 aaKnown RBP9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A18PA6NE21 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A16PA6NEW6 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A20PA6NIJ5 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A9PA6NNJ1 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A12PA8MX19 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A5PA8MXJ8 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 LY6LH3BQJ8 138 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 PSPNO60542 156 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 ENTPD6O75354 484 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 SRSF10O75494 262 aaKnown RBP9.44□□□□□ -0.9
CRTC3-203ENST00000558005 DCTN3O75935 186 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM107AO95990 144 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 MRPL3P09001 348 aaKnown RBP9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A15PP0C7V4 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A13PP0C7W8 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A14PP0C7W9 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM90A24PP0C7X0 464 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 PRKACAP17612 351 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 CDX1P47902 265 aaPredicted RBP9.44□□□□□ -0.9
CRTC3-203ENST00000558005 CXCR4P61073 352 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 PPP1R8Q12972 351 aaKnown RBP9.44□□□□□ -0.9
CRTC3-203ENST00000558005 BNIP1Q12981 228 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 TRIM25Q14258 630 aaKnown RBP9.44□□□□□ -0.9
CRTC3-203ENST00000558005 RBM39Q14498 530 aaKnown RBP9.44□□□□□ -0.9
CRTC3-203ENST00000558005 PNLIPRP3Q17RR3 467 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 FAM27D1Q5T7N8 215 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 C10orf99Q6UWK7 81 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 GID4Q8IVV7 300 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 SLC35F2Q8IXU6 374 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 BATF2Q8N1L9 274 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 STPG2Q8N412 459 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 TPRX1Q8N7U7 411 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 BBS1Q8NFJ9 593 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 OR10A7Q8NGE5 316 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 OR8H1Q8NGG4 311 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 OR52N4Q8NGI2 321 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 ELAC2Q9BQ52 826 aaKnown RBP9.44□□□□□ -0.9
CRTC3-203ENST00000558005 NCOR1P1Q9H4R4 102 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 ZMAT4Q9H898 229 aa9.44□□□□□ -0.9
CRTC3-203ENST00000558005 ZNF286AQ9HBT8 521 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms