RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ZNF470Q6ECI4 717 aa3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 FRMPD2BQ6IN97 320 aa3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 ABHD12BQ7Z5M8 362 aaPredicted RBP3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 OR51G1Q8NGK1 321 aa3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 OR51A7Q8NH64 312 aa3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 RCN3Q96D15 328 aa3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 BMFQ96LC9 184 aa3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 NRIP2Q9BQI9 281 aa3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 UBXN6Q9BZV1 441 aa3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 REEP1Q9H902 201 aa3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 MRM2Q9UI43 246 aaKnown RBP3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 ZNF107Q9UII5 783 aaPredicted RBP3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 NXT1Q9UKK6 140 aaKnown RBP3.49□□□□□ -1.85
MTHFD1-216ENST00000557539 FAM168BA1KXE4 195 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 SYCE1LA8MT33 242 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 SEC14L6B5MCN3 397 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 DFFAO00273 331 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 PEX7O00628 323 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 ZW10O43264 779 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 SLC16A7O60669 478 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 ZMPSTE24O75844 475 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 TRAPPC6AO75865 159 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 RAB3DO95716 219 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 PTTG1O95997 202 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 PGA4P0DJD7 388 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 PGA3P0DJD8 388 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 CD37P11049 281 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 PRPS2P11908 318 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 RAB3BP20337 219 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 GATA2P23769 480 aaPredicted RBP3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 VSX2P58304 361 aaPredicted RBP3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 UBE2KP61086 200 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 DGCR6Q14129 220 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 MAD2L1BPQ15013 274 aaPredicted RBP3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 QPRTQ15274 297 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 TAL2Q16559 108 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 DEFB121Q5J5C9 76 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 TCTEX1D4Q5JR98 221 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 ZFAND6Q6FIF0 208 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 ZNF493Q6ZR52 646 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 OR10AD1Q8NGE0 317 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 MCOLN3Q8TDD5 553 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 LRRC58Q96CX6 371 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 SGTBQ96EQ0 304 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 TMEM101Q96IK0 257 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 RNF145Q96MT1 663 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 ZNF681Q96N22 645 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 CYTH2Q99418 400 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 C1orf198Q9H425 327 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 MS4A12Q9NXJ0 267 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 PCYOX1Q9UHG3 505 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 FAT2Q9NYQ8 4349 aa3.48□□□□□ -1.85
MTHFD1-216ENST00000557539 DNAJC13O75165 2243 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 MYCBP2O75592 4640 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 TRAV8-7A0A075B6U6 113 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 GJE1A6NN92 205 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 H7C417 338 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 SNAI2O43623 268 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 ENSAO43768 121 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 NPIPB7O75200 414 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 FABP3P05413 133 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 SMIM10L1P0DMW3 83 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 CTSEP14091 401 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 ZNF30P17039 623 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 ARL2P36404 184 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 CEACAM6P40199 344 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 RANBP1P43487 201 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 CAV2P51636 162 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 HCCSP53701 268 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 TAS2R60P59551 318 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 PPP1CBP62140 327 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 RPL31P62899 125 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 SMARCB1Q12824 385 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 PIGHQ14442 188 aaPredicted RBP3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 HERPUD1Q15011 391 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 C9orf129Q5T035 196 aaKnown RBP3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 CPTPQ5TA50 214 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 IGFL2Q6UWQ7 119 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 BAIAP2L2Q6UXY1 529 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 H2AFVQ71UI9 128 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 ABHD13Q7L211 337 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 GKN2Q86XP6 184 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 CDKL3Q8IVW4 592 aaPredicted RBP3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 C17orf78Q8N4C9 275 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 NPWQ8N729 165 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 DCAF4L2Q8NA75 395 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 C20orf203Q8NBC4 194 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 OR6K2Q8NGY2 324 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 OR4S2Q8NH73 311 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 ZFP90Q8TF47 636 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 TMEM239Q8WW34 195 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 SMIM10Q96HG1 83 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 COPS4Q9BT78 406 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 PSTPIP2Q9H939 334 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 OR2S2Q9NQN1 319 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 NECAP2Q9NVZ3 263 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 SLC25A37Q9NYZ2 338 aa3.47□□□□□ -1.85
MTHFD1-216ENST00000557539 MTFP1Q9UDX5 166 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms