RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 M0R036 132 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 GPR31O00270 319 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 MRASO14807 208 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TAPBPO15533 448 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 MBTPS2O43462 519 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 XRCC2O43543 280 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 SYNGR1O43759 233 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 PSMG1O95456 288 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 SEMG1P04279 462 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ARG1P05089 322 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR56A5P0C7T3 313 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 HIST1H1EP10412 219 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 UGT2B7P16662 529 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TBPP20226 339 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 APLNRP35414 380 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 HBA1P69905 142 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 MXD1Q05195 221 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 PUDPQ08623 228 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 RUNX3Q13761 415 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 FAM53BQ14153 422 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 RPEL1Q2QD12 228 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 GLYR1Q49A26 553 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 HSD17B12Q53GQ0 312 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 FAM74A1Q5RGS3 127 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 C11orf71Q6IPW1 123 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 DCUN1D2Q6PH85 259 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 REG3GQ6UW15 175 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 MBOAT2Q6ZWT7 520 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OLIG3Q7RTU3 272 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TSEN54Q7Z6J9 526 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ARPINQ7Z6K5 226 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 DEFB128Q7Z7B8 93 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 SLC35F6Q8N357 371 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF664Q8N3J9 261 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 C12orf45Q8N5I9 185 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 CHST4Q8NCG5 386 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR4F17Q8NGA8 305 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR6T1Q8NGN1 323 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR9Q1Q8NGQ5 310 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR1L6Q8NGR2 347 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR13C4Q8NGS5 318 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR5J2Q8NH18 312 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR2AE1Q8NHA4 323 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR5K1Q8NHB7 308 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 VN1R17PQ8TDU5 208 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 FLYWCH2Q96CP2 140 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 NARS2Q96I59 477 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR4F4Q96R69 305 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 KIR2DL4Q99706 377 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 SULT4A1Q9BR01 284 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM38BQ9NVV0 291 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 MCUBQ9NWR8 336 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 DHRS4-AS1Q9P1J3 65 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TIMM10BQ9Y5J6 103 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 LRP5O75197 1615 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 COL16A1Q07092 1604 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 AGLP35573 1532 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 KIAA0586Q9BVV6 1533 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 HELZP42694 1942 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 RGPD1P0DJD0 1748 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 NUP188Q5SRE5 1749 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ARAP2Q8WZ64 1704 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF106Q9H2Y7 1883 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MEIKINA0A087WXM9 373 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TRBV9A0A0B4J1U6 114 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 A0A1B0GWB2 263 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 FAM168BA1KXE4 195 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 VPS37CA5D8V6 355 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 F5H6K3 240 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 AIPO00170 330 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CORTO00230 105 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CYB5BO43169 146 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 GAS8-AS1O95177 125 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MPC2O95563 127 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 HLA-AP01891 365 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SHBGP04278 402 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CRYBA1P05813 215 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PSG2P11465 335 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 IL7P13232 177 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 BDKRB1P46663 353 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 QARSP47897 775 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CXCL12P48061 93 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 DUSP3P51452 185 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RAG2P55895 527 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 VSX2P58304 361 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RPL19P84098 196 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 KLRC3Q07444 240 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SLC10A7Q0GE19 358 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF154Q13106 437 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RAB31Q13636 194 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 LAGE3Q14657 143 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 POU2AF1Q16633 256 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM241Q24JQ0 296 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 FAM162BQ5T6X4 162 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SLC22A10Q63ZE4 541 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 LPCAT4Q643R3 524 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 STUMQ69YW2 141 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 UFSP1Q6NVU6 142 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms