RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ARSJQ5FYB0 599 aaPredicted RBP11.42□□□□□ -0.58
SNX6-210ENST00000557341 ZFP1Q6P2D0 407 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 ACBD7Q8N6N7 88 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 OR51A4Q8NGJ6 313 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 OR13C9Q8NGT0 318 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 OR10AC1Q8NH08 325 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 PELI1Q96FA3 418 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 MYCBPQ99417 103 aaPredicted RBP11.42□□□□□ -0.58
SNX6-210ENST00000557341 PRSS22Q9GZN4 317 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 GAL3ST2Q9H3Q3 398 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 NEK6Q9HC98 313 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 HMG20AQ9NP66 347 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 SERTAD4Q9NUC0 356 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 GSTK1Q9Y2Q3 226 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 HILPDAQ9Y5L2 63 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 TRGV10A0A0A0MS01 117 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 J3QLW9 94 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 SH2D1BO14796 132 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 PEX14O75381 377 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 KDM4BO94953 1096 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 OR2H2O95918 312 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 MT-ND2P03891 347 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 CALCBP10092 127 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 ZNF19P17023 458 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 ALKBH1Q13686 389 aaKnown RBP11.41□□□□□ -0.58
SNX6-210ENST00000557341 HIST2H2BDQ6DRA6 164 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 OR5D18Q8NGL1 313 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 SPACA5Q96QH8 159 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 ALG8Q9BVK2 526 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 COMMD4Q9H0A8 199 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 RHOFQ9HBH0 211 aa11.41□□□□□ -0.58
SNX6-210ENST00000557341 EXOGQ9Y2C4 368 aaKnown RBP11.41□□□□□ -0.58
SNX6-210ENST00000557341 IGKV1-12A0A0C4DH73 117 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 FUOMA2VDF0 154 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 OR4C45A6NMZ5 311 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 E9PQ18 207 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 H3BNX3 289 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 IGKV1D-12P01611 117 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 ALDOBP05062 364 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 CSN2P05814 226 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 DBTP11182 482 aaKnown RBP11.4□□□□□ -0.58
SNX6-210ENST00000557341 ZNF44P15621 663 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 HTR1DP28221 377 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 GALEQ14376 348 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 KPNB1Q14974 876 aaKnown RBP11.4□□□□□ -0.58
SNX6-210ENST00000557341 OR52W1Q6IF63 320 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 SYS1Q8N2H4 156 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 CBR4Q8N4T8 237 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 OR4P4Q8NGL7 312 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 LGALS12Q96DT0 336 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 GMPPBQ9Y5P6 360 aa11.4□□□□□ -0.58
SNX6-210ENST00000557341 G3V4G9 280 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 H3BUI4 141 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 MMP23AO75900 390 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 HCKP08631 526 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 RPSAP08865 295 aaKnown RBP11.39□□□□□ -0.59
SNX6-210ENST00000557341 JUNBP17275 347 aaPredicted RBP11.39□□□□□ -0.59
SNX6-210ENST00000557341 ARHGDIBP52566 201 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 NSUN5P1Q3KNT7 163 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 PRAMEF5Q5TYX0 476 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 HEPN1Q6WQI6 88 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 RTN4RL2Q86UN3 420 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 NDUFA11Q86Y39 141 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 SAXO1Q8IYX7 474 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 LYG1Q8N1E2 194 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 CHST4Q8NCG5 386 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 ZNF596Q8TC21 504 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 ZCCHC4Q9H5U6 513 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 TAS2R3Q9NYW6 316 aa11.39□□□□□ -0.59
SNX6-210ENST00000557341 TMEM212A6NML5 194 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 SULT1B1O43704 296 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 MPZL2O60487 215 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 FADS2O95864 444 aaKnown RBP11.38□□□□□ -0.59
SNX6-210ENST00000557341 CD28P10747 220 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 GABRB1P18505 474 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 CDK2P24941 298 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 LMO1P25800 156 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 PTGFRP43088 359 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 VDAC2P45880 294 aaPredicted RBP11.38□□□□□ -0.59
SNX6-210ENST00000557341 AESQ08117 197 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 MRPL28Q13084 256 aaKnown RBP11.38□□□□□ -0.59
SNX6-210ENST00000557341 BEAN1Q3B7T3 259 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 SAMD5Q5TGI4 173 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 C16orf82Q7Z2V1 217 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 LHFPL3Q86UP9 236 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 SERPINA12Q8IW75 414 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 ABHD12Q8N2K0 398 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 WIPF2Q8TF74 440 aaPredicted RBP11.38□□□□□ -0.59
SNX6-210ENST00000557341 CORO2AQ92828 525 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 CPNE2Q96FN4 548 aaPredicted RBP11.38□□□□□ -0.59
SNX6-210ENST00000557341 AKR1E2Q96JD6 320 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 Q96MT0 163 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 OR5M11Q96RB7 305 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 C9orf16Q9BUW7 83 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 WNT10AQ9GZT5 417 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 INPP5EQ9NRR6 644 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 AASSQ9UDR5 926 aa11.38□□□□□ -0.59
SNX6-210ENST00000557341 ODAMA1E959 279 aa11.37□□□□□ -0.59
SNX6-210ENST00000557341 FAM172BPA6NC97 362 aa11.37□□□□□ -0.59
SNX6-210ENST00000557341 FAM90A22PA8MWA6 464 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms