RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CENPOQ9BU64 300 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 SIRPDQ9H106 197 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 RANBP3Q9H6Z4 567 aaPredicted RBP2.78□□□□□ -1.96
CHD8-212ENST00000557329 SRD5A3Q9H8P0 318 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 ZNF702PQ9H963 129 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 WDR76Q9H967 626 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 EXOSC3Q9NQT5 275 aaKnown RBP2.78□□□□□ -1.96
CHD8-212ENST00000557329 TMEM100Q9NV29 134 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 TMEM38BQ9NVV0 291 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 C1orf109Q9NX04 203 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 CHCHD3Q9NX63 227 aaKnown RBP2.78□□□□□ -1.96
CHD8-212ENST00000557329 GLTPQ9NZD2 209 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 PTTG3PQ9NZH4 202 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 ANGPT4Q9Y264 503 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 ETV7Q9Y603 341 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 NUP214P35658 2090 aaPredicted RBP2.78□□□□□ -1.96
CHD8-212ENST00000557329 LYSTQ99698 3801 aa2.78□□□□□ -1.96
CHD8-212ENST00000557329 HUWE1Q7Z6Z7 4374 aaKnown RBP2.77□□□□□ -1.97
CHD8-212ENST00000557329 FRAS1Q86XX4 4008 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 A0A087WUJ7 227 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 TRAV38-1A0A0B4J264 116 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 EXOC1LA0A1B0GW35 172 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 FAM159BA6NKW6 160 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 TMEM114B3SHH9 223 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 FTCDNL1E5RQL4 147 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 LRRN3E7EW58 273 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 CTDSPLO15194 276 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 HDAC3O15379 428 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 NDUFB3O43676 98 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 PEX11AO75192 247 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 GLCEO94923 617 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 SNAP29O95721 258 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 ECDO95905 644 aaPredicted RBP2.77□□□□□ -1.97
CHD8-212ENST00000557329 IGF2P01344 180 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 DBIP07108 87 aaKnown RBP2.77□□□□□ -1.97
CHD8-212ENST00000557329 UMPSP11172 480 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 PRG2P13727 222 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 HSD17B1P14061 328 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 ATP6V1B1P15313 513 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 SDC1P18827 310 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 IMPDH1P20839 514 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 COX7A1P24310 79 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 PMELP40967 661 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 ERFP50548 548 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 PKNOX1P55347 436 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 HBA1P69905 142 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 PSG4Q00888 419 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 PUDPQ08623 228 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 C2orf54Q08AI8 447 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 DYNC1I2Q13409 638 aaKnown RBP2.77□□□□□ -1.97
CHD8-212ENST00000557329 SYPL1Q16563 259 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 CNPY1Q3B7I2 92 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 FAM27D1Q5T7N8 215 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 HHATQ5VTY9 493 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 CD164L2Q6UWJ8 174 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 ZNF730Q6ZMV8 503 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 WDR88Q6ZMY6 472 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 Q6ZR03 302 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 SLC35D2Q76EJ3 337 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 CCDC91Q7Z6B0 441 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 DPPA2Q7Z7J5 298 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 DHDDSQ86SQ9 333 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 C11orf53Q8IXP5 236 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 CLECL1Q8IZS7 167 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 RPP25LQ8N5L8 163 aaKnown RBP2.77□□□□□ -1.97
CHD8-212ENST00000557329 CLDN22Q8N7P3 220 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 ANKFN1Q8N957 763 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 KLHL30-AS1Q8NEE0 82 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 OR13G1Q8NGZ3 307 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 AGR3Q8TD06 166 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 STMN2Q93045 179 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 HIST1H2ACQ93077 130 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 PTP4A1Q93096 173 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 SLC38A4Q969I6 547 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 TMEM237Q96Q45 408 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 CCL13Q99616 98 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 C1orf50Q9BV19 199 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 ZNF350Q9GZX5 532 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 ARMC7Q9H6L4 198 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 ZNF256Q9Y2P7 627 aaPredicted RBP2.77□□□□□ -1.97
CHD8-212ENST00000557329 STARD10Q9Y365 291 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 KPTNQ9Y664 436 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 TANC2Q9HCD6 1990 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 HERC2O95714 4834 aa2.77□□□□□ -1.97
CHD8-212ENST00000557329 DNAH3Q8TD57 4116 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 TRAV36DV7A0A075B6V5 113 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 A0A096LPI6 279 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 KPNA4O00629 521 aaPredicted RBP2.76□□□□□ -1.97
CHD8-212ENST00000557329 DEDDO75618 318 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 SLC2A10O95528 541 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 SERPINE1P05121 402 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 FCGR3AP08637 254 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 IFI6P09912 130 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 MAGEA4P43358 317 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 POU3F4P49335 361 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 CEBPDP49716 269 aaPredicted RBP2.76□□□□□ -1.97
CHD8-212ENST00000557329 RGS6P49758 472 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 UBE2E1P51965 193 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 PLTPP55058 493 aa2.76□□□□□ -1.97
CHD8-212ENST00000557329 NCALDP61601 193 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms