RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 NSL1Q96IY1 281 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 CEP19Q96LK0 163 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 CNN2Q99439 309 aaKnown RBP6.92□□□□□ -1.3
VRK1-206ENST00000557222 CLEC7AQ9BXN2 247 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 PRRG3Q9BZD7 231 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 TMEM133Q9H2Q1 129 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 GPR173Q9NS66 373 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 MTCH1Q9NZJ7 389 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 DPM3Q9P2X0 92 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 GLS2Q9UI32 602 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 OR52A1Q9UKL2 312 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 IKZF2Q9UKS7 526 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 UBE2J1Q9Y385 318 aaPredicted RBP6.92□□□□□ -1.3
VRK1-206ENST00000557222 HILPDAQ9Y5L2 63 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 X6R8D5 127 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 STAB2Q8WWQ8 2551 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 FUOMA2VDF0 154 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 PRR32B1ATL7 298 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 PSMD9O00233 223 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 MGST3O14880 152 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 GATBO75879 557 aaKnown RBP6.91□□□□□ -1.3
VRK1-206ENST00000557222 OR2F2O95006 317 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 SERPINA3P01011 423 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 SLC6A1P30531 599 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 CDC42P60953 191 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 ESRRGP62508 458 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 MFGE8Q08431 387 aaPredicted RBP6.91□□□□□ -1.3
VRK1-206ENST00000557222 ZNF146Q15072 292 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 TCTEX1D4Q5JR98 221 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 MEPCEQ7L2J0 689 aaKnown RBP6.91□□□□□ -1.3
VRK1-206ENST00000557222 TCF23Q7RTU1 214 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 TMEM179BQ7Z7N9 219 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 ANGPTL5Q86XS5 388 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 EGFL6Q8IUX8 553 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 ZNF676Q8N7Q3 588 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 OR4P4Q8NGL7 312 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 NDNFQ8TB73 568 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 ZNF596Q8TC21 504 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 CORO2AQ92828 525 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 MYDGFQ969H8 173 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 WWC2-AS2Q96NR7 200 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 RBM14Q96PK6 669 aaKnown RBP6.91□□□□□ -1.3
VRK1-206ENST00000557222 OR5M11Q96RB7 305 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 MCRIP2Q9BUT9 160 aaKnown RBP6.91□□□□□ -1.3
VRK1-206ENST00000557222 KRTAP4-11Q9BYQ6 195 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 CLN6Q9NWW5 311 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 TAS2R1Q9NYW7 299 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 TVP23BQ9NYZ1 205 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 FBXL7Q9UJT9 491 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 COPS3Q9UNS2 423 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 DNAH7Q8WXX0 4024 aa6.91□□□□□ -1.3
VRK1-206ENST00000557222 LEUTXA8MZ59 168 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 OOSP1A8MZH6 123 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 ZNF670-ZNF695F2Z2N8 137 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 HAND1O96004 215 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 MRPL3P09001 348 aaKnown RBP6.9□□□□□ -1.3
VRK1-206ENST00000557222 CALB2P22676 271 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 CD34P28906 385 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 CEACAM3P40198 252 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 CRISP1P54107 249 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 CXCR4P61073 352 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 EFNB1P98172 346 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 ZNF91Q05481 1191 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 TMEM95Q3KNT9 176 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 DEFB121Q5J5C9 76 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 SPIN3Q5JUX0 258 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 NXNL2Q5VZ03 156 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 TMEM236Q5W0B7 351 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 CCDC144NLQ6NUI1 221 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 HEPN1Q6WQI6 88 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 THNSL2Q86YJ6 484 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 SLC35F2Q8IXU6 374 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 ABHD12Q8N2K0 398 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 DNAAF1Q8NEP3 725 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 OR51D1Q8NGF3 324 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 CANT1Q8WVQ1 401 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 DPF1Q92782 380 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 STMN2Q93045 179 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 APOL4Q9BPW4 351 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 CHST5Q9GZS9 411 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 GAL3ST2Q9H3Q3 398 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 RHOFQ9HBH0 211 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 INPP5EQ9NRR6 644 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 TAS2R3Q9NYW6 316 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 H2AFY2Q9P0M6 372 aaPredicted RBP6.9□□□□□ -1.3
VRK1-206ENST00000557222 HHLA2Q9UM44 414 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 PCDHGB5Q9Y5G0 923 aa6.9□□□□□ -1.3
VRK1-206ENST00000557222 KIAA2026Q5HYC2 2103 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 DYNC2H1Q8NCM8 4307 aaKnown RBP6.89□□□□□ -1.31
VRK1-206ENST00000557222 TRBV2A0A0J9YWF9 115 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 FAM230AA0A1W2PPH8 454 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 WI2-2373I1.2A0A1W2PRP0 233 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 A0A1W2PRX2 142 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 F8VVB4 439 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 F8VWA3 439 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 SYT7O43581 403 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 SULT1C4O75897 302 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 FAM107AO95990 144 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 CYB5AP00167 134 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms