RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 LINC00527Q9UJ94 153 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 BAG5Q9UL15 447 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 PYCARDQ9ULZ3 195 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 GTF2A1LQ9UNN4 478 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 MOB4Q9Y3A3 225 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 IER3IP1Q9Y5U9 82 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 SESN1Q9Y6P5 492 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 HSPE1-MOB4S4R3N1 261 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 hCG_38984A0A1B0GV85 526 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 ARRDC5A6NEK1 342 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF850A8MQ14 1090 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 I3L521 148 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 CDC42EP2O14613 210 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 OVOL1O14753 267 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 UBDO15205 165 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 HSPA12AO43301 675 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 NOS1APO75052 506 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-223ENST00000557076 SAP30O75446 220 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 IGLV1-47P01700 117 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 IGHG4P01861 327 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 T-ENOLP0DO92 83 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 IFNA8P32881 189 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 MNDAP41218 407 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 GPR12P47775 334 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 CRYBA2P53672 197 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 MEF2CQ06413 473 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF616Q08AN1 781 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 KRR1Q13601 381 aaKnown RBP3.6□□□□□ -1.83
SCFD1-223ENST00000557076 SMIM21Q3B7S5 101 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 KLHL12Q53G59 568 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 PAGE3Q5JUK9 113 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 CEMP1Q6PRD7 247 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-223ENST00000557076 LINC00322Q6ZN03 302 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-223ENST00000557076 LINC00336Q6ZUF6 198 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 KCTD8Q6ZWB6 473 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 SLC35E3Q7Z769 313 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 FUNDC1Q8IVP5 155 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 NRMQ8IXM6 262 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 TIGD4Q8IY51 512 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 MICU2Q8IYU8 434 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 ABHD12Q8N2K0 398 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 C5orf56Q8N8D9 126 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 OR13C2Q8NGS9 318 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 MYOZ3Q8TDC0 251 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 DCUN1D4Q92564 292 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 ITFG2Q969R8 447 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 UBE2E2Q96LR5 201 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF714Q96N38 554 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 HIST1H2AAQ96QV6 131 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 OR8B4Q96RC9 309 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 CHCHD6Q9BRQ6 235 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 PAPOLGQ9BWT3 736 aaKnown RBP3.6□□□□□ -1.83
SCFD1-223ENST00000557076 TMEM133Q9H2Q1 129 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 RGCCQ9H4X1 137 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 TUBA4BQ9H853 241 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 ISYNA1Q9NPH2 558 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 VPS13DQ5THJ4 4388 aa3.6□□□□□ -1.83
SCFD1-223ENST00000557076 A0A087WUU8 490 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 hADV38S2A0JD32 116 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 NUPR2A6NF83 97 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 C12orf77C9JDV5 145 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 H3BSH0 61 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 BUB1B-PAK6H3BSN5 160 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 J3KTA2 159 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 DEDDO75618 318 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 NDUFB2O95178 105 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 IFNA14P01570 189 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 APOC1P02654 83 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 TROVE2P10155 538 aaKnown RBP eCLIP3.59□□□□□ -1.83
SCFD1-223ENST00000557076 SLC2A1P11166 492 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 PIPP12273 146 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-223ENST00000557076 MT3P25713 68 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 PSMB8P28062 276 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 CEACAM3P40198 252 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 SLC15A1P46059 708 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 OR1E2P47887 323 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 GPM6AP51674 278 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 RPS6KA3P51812 740 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 PRKXP51817 358 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 PRRX1P54821 245 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 ISL1P61371 349 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 GNG3P63215 75 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 PRDX4Q13162 271 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 EBI3Q14213 229 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 TRAM2Q15035 370 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 TAF13Q15543 124 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 CYP51A1Q16850 503 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 WHAMMP3Q1A5X7 153 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 CEACAM21Q3KPI0 293 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 FGD3Q5JSP0 725 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 ASPHD1Q5U4P2 390 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 OR52W1Q6IF63 320 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 MBOAT2Q6ZWT7 520 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 PRSS45Q7RTY3 260 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 PGAM4Q8N0Y7 254 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF676Q8N7Q3 588 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF491Q8N8L2 437 aa3.59□□□□□ -1.83
SCFD1-223ENST00000557076 EIF1ADQ8N9N8 165 aaKnown RBP3.59□□□□□ -1.83
SCFD1-223ENST00000557076 MNS1Q8NEH6 495 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms