RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 DKK1O94907 266 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 IFNA17P01571 189 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 S100PP25815 95 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 KIAA0141Q14154 515 aaPredicted RBP9.86□□□□□ -0.83
SRP54-213ENST00000556994 HEPN1Q6WQI6 88 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 OSR2Q8N2R0 312 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 TMEM217Q8N7C4 229 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 TMEM171Q8WVE6 324 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 GGACTQ9BVM4 153 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 ANGPTL4Q9BY76 406 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 ZNF286AQ9HBT8 521 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 LIPGQ9Y5X9 500 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 C3orf85A0A1B0GTC6 90 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 H0YL77 283 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 H3BQ15 152 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 CST7O76096 145 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 NRASP01111 189 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 CCL3P10147 92 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 NTF4P34130 210 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 AFF3P51826 1226 aaKnown RBP9.85□□□□□ -0.83
SRP54-213ENST00000556994 NDUFA6P56556 154 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 HERV-K104P61576 105 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 RND3P61587 244 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 CXorf66Q5JRM2 361 aaPredicted RBP9.85□□□□□ -0.83
SRP54-213ENST00000556994 SPIN3Q5JUX0 258 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 CDPF1Q6NVV7 123 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 SPSB3Q6PJ21 355 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 Q6ZSR3 168 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 SPSB1Q96BD6 273 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 MOB3AQ96BX8 217 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 NTNG2Q96CW9 530 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 ZNF442Q9H7R0 627 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 WNT16Q9UBV4 365 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 SLC7A11Q9UPY5 501 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 FRYQ5TBA9 3013 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 A0A0J9YW62 118 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 NR2C1P13056 603 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 CRYGSP22914 178 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 TAGLN2P37802 199 aaKnown RBP9.85□□□□□ -0.83
SRP54-213ENST00000556994 NKX2-1P43699 371 aaPredicted RBP9.85□□□□□ -0.83
SRP54-213ENST00000556994 STARD6P59095 220 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 RUNX1Q01196 453 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 CNN3Q15417 329 aaKnown RBP9.85□□□□□ -0.83
SRP54-213ENST00000556994 GUSBP11Q6P575 273 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 MAML2Q8IZL2 1156 aaPredicted RBP9.85□□□□□ -0.83
SRP54-213ENST00000556994 CADM4Q8NFZ8 388 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 PIGCQ92535 297 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 C10orf35Q96D05 121 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 RAB39BQ96DA2 213 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 MALSU1Q96EH3 234 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 YPEL4Q96NS1 127 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 SRXN1Q9BYN0 137 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 TMPRSS5Q9H3S3 457 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 BCO1Q9HAY6 547 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 CRLF2Q9HC73 371 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 FOXD3Q9UJU5 478 aaPredicted RBP9.85□□□□□ -0.83
SRP54-213ENST00000556994 RARRES3Q9UL19 164 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 TMED3Q9Y3Q3 217 aa9.85□□□□□ -0.83
SRP54-213ENST00000556994 IFITM10A6NMD0 228 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 TP53I11O14683 189 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 MPPED1O15442 326 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 SYNGR3O43761 229 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 OR7C1O76099 320 aaPredicted RBP9.84□□□□□ -0.83
SRP54-213ENST00000556994 PPYP01298 95 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 CXCL1P09341 107 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 B4GALT1P15291 398 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 EPHA1P21709 976 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 NPBWR2P48146 333 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 RAB1AP62820 205 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 RAB30Q15771 203 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 C9orf152Q5JTZ5 239 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 ZNF468Q5VIY5 522 aaPredicted RBP9.84□□□□□ -0.83
SRP54-213ENST00000556994 FOXL2NBQ6ZUU3 175 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 P4HA3Q7Z4N8 544 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 OR5C1Q8NGR4 320 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 OR14L1PQ8NHC6 308 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 FGFBP3Q8TAT2 258 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 MUCL1Q96DR8 90 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 ALKBH3Q96Q83 286 aaPredicted RBP9.84□□□□□ -0.83
SRP54-213ENST00000556994 TOLLIPQ9H0E2 274 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 GLRX2Q9NS18 164 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 UBE2J1Q9Y385 318 aaPredicted RBP9.84□□□□□ -0.83
SRP54-213ENST00000556994 CEP192Q8TEP8 1941 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 A0A1W2PQM1 296 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 PROB1E7EW31 1015 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 TERTO14746 1132 aaKnown RBP9.84□□□□□ -0.83
SRP54-213ENST00000556994 ZIC3O60481 467 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 ZNF32P17041 273 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 GNRHRP30968 328 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 HTR5AP47898 357 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 RGS19P49795 217 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 UBE2KP61086 200 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 MALLQ13021 153 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 ZNF674Q2M3X9 581 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 FAM27BQ5VT28 67 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 ZNF385CQ66K41 422 aaPredicted RBP9.84□□□□□ -0.83
SRP54-213ENST00000556994 CALHM1Q8IU99 346 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 LFNGQ8NES3 379 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 NAT6Q93015 286 aa9.84□□□□□ -0.83
SRP54-213ENST00000556994 SLC7A10Q9NS82 523 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms