RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 AMY2AP04746 511 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 OR2T7P0C7T2 308 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 PRKACAP17612 351 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 RBP2P50120 134 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 KHDC1LQ5JSQ8 128 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 SPIN3Q5JUX0 258 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 HEPN1Q6WQI6 88 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 RTN4RL2Q86UN3 420 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 DNAAF1Q8NEP3 725 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 ZNF596Q8TC21 504 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 PP6455Q8WZ26 134 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 C10orf35Q96D05 121 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 RBM14Q96PK6 669 aaKnown RBP14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 GAL3ST2Q9H3Q3 398 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 WARS2Q9UGM6 360 aaKnown RBP14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 POMPQ9Y244 141 aa14.58□□□□□ -0.08
VIPAS39-209ENST00000556909 TRGV10A0A0A0MS01 117 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 IGKV1-9A0A0C4DH69 117 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 SULT1C4O75897 302 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 CYB5AP00167 134 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 UBCP0CG48 685 aaKnown RBP14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 CDK2P24941 298 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 CD34P28906 385 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 GDNFP39905 211 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 KIR3DL2P43630 455 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 ARHGDIBP52566 201 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 ATP1B3P54709 279 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 CDC42P60953 191 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 OR52W1Q6IF63 320 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 OR10H4Q8NGA5 316 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 BCAS4Q8TDM0 211 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 STMN2Q93045 179 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 ADAT3Q96EY9 351 aaPredicted RBP14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 ZNF286AQ9HBT8 521 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 GLS2Q9UI32 602 aa14.57□□□□□ -0.08
VIPAS39-209ENST00000556909 LEUTXA8MZ59 168 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 CLIC3O95833 236 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 OR2H2O95918 312 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 HTR1FP30939 366 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 HOXD3P31249 432 aaPredicted RBP14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 MTCP1P56278 107 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 EGFEM1PQ0D2K5 195 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 DNAL1Q4LDG9 190 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 RDH10Q8IZV5 341 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 LINC00482Q8N8I6 264 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 HMG20AQ9NP66 347 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 EXOSC4Q9NPD3 245 aaKnown RBP14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 HHLA2Q9UM44 414 aa14.56□□□□□ -0.08
VIPAS39-209ENST00000556909 GYG2O15488 501 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 ISL1P61371 349 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 HLA-DRB5Q30154 266 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 DEFB121Q5J5C9 76 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 TPTE2P1Q5T6R2 138 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 KDM4DQ6B0I6 523 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 LHFPL2Q6ZUX7 228 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 CORO2AQ92828 525 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 RNF166Q96A37 237 aaPredicted RBP14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 TAS2R3Q9NYW6 316 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 GNG8Q9UK08 70 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 GSTK1Q9Y2Q3 226 aa14.55□□□□□ -0.08
VIPAS39-209ENST00000556909 IGKV1-12A0A0C4DH73 117 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 G3V2T6 193 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 BUB1B-PAK6H3BSN5 160 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 IGKV1D-12P01611 117 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 ATF1P18846 271 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 PRKACBP22694 351 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 CEACAM3P40198 252 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 GLIPR1P48060 266 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 AESQ08117 197 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 PDZK1IP1Q13113 114 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 ETV3LQ6ZN32 361 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 UTS2BQ765I0 119 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 FAM220AQ7Z4H9 259 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 OSR2Q8N2R0 312 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 RFT1Q96AA3 541 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 COMMD4Q9H0A8 199 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 GABARAPL1Q9H0R8 117 aa14.54□□□□□ -0.08
VIPAS39-209ENST00000556909 A0A087X0M5 115 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 A0A1B0GX30 115 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 ODAMA1E959 279 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 FUOMA2VDF0 154 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 LY6LH3BQJ8 138 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 M0QZK8 103 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 TOR1AO14656 332 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 SH2D1BO14796 132 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 LMO1P25800 156 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 PTGFRP43088 359 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 ZNF85Q03923 595 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 KPNB1Q14974 876 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 ATP6AP1Q15904 470 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 TP53I3Q53FA7 332 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 C9orf152Q5JTZ5 239 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 UTF1Q5T230 341 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 CREB3L1Q96BA8 519 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 SPSB1Q96BD6 273 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 FGGYQ96C11 551 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 OPALINQ96PE5 141 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 MOB4Q9Y3A3 225 aa14.53□□□□□ -0.08
VIPAS39-209ENST00000556909 PCDHGB5Q9Y5G0 923 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms