RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 GNGT2O14610 69 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 ARPC2O15144 300 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 CD5LO43866 347 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 PAGE4O60829 102 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 DIRAS1O95057 198 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 SOX14O95416 240 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 CD160O95971 181 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 FCGR3AP08637 254 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 CT45A10P0DMU9 189 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 PIPP12273 146 aaPredicted RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 CD99P14209 185 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 ZNF17P17021 662 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 PSMB1P20618 241 aaKnown RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 CFPP27918 469 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 HOXD9P28356 352 aaPredicted RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 BDKRB1P46663 353 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 GYG1P46976 350 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 RPS23P62266 143 aaKnown RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 GRB2P62993 217 aaKnown RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 ELAVL1Q15717 326 aaKnown RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 ZNF77Q15935 545 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 ZSWIM7Q19AV6 140 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 ALG10Q5BKT4 473 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 C19orf54Q5BKX5 351 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 GFI1BQ5VTD9 330 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 ZNF626Q68DY1 528 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 PLXDC2Q6UX71 529 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 C12orf54Q6X4T0 127 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 Q6ZTK2 550 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 SMIM5Q71RC9 77 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 COMMD6Q7Z4G1 85 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 PPP1R27Q86WC6 154 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 CALHM3Q86XJ0 350 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 TGIF2LYQ8IUE0 185 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 ZNF547Q8IVP9 402 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 FAM219AQ8IW50 185 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 GPR135Q8IZ08 494 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 ACVR1CQ8NER5 493 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 OR52E2Q8NGJ4 325 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 OR4L1Q8NH43 312 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 MFSD8Q8NHS3 518 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 LYPD6BQ8NI32 183 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 ABHD5Q8WTS1 349 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 SOCS4Q8WXH5 440 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 PCED1BQ96HM7 432 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 SGK494Q96LW2 274 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 LRRC3BQ96PB8 259 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 TRIB3Q96RU7 358 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 LRRC61Q9BV99 259 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 POLR2J3Q9H1A7 115 aaKnown RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 RERGLQ9H628 205 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 POPDC3Q9HBV1 291 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 APOBEC3GQ9HC16 384 aaKnown RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 HEYLQ9NQ87 328 aaPredicted RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 FAM206AQ9NX38 181 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 PLEKHB1Q9UF11 243 aaPredicted RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 PRO0628Q9UI54 55 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 BTRCQ9Y297 605 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 STRCP1A6NGW2 1772 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 WDR81Q562E7 1941 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 MYH14Q7Z406 1995 aaKnown RBP5.36□□□□□ -1.55
TDP1-215ENST00000556498 TRAV36DV7A0A075B6V5 113 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 ZNF816-ZNF321PA0A0X1KG74 233 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 IGLC7A0M8Q6 106 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 ASPDHA6ND91 283 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FAM90A18PA6NE21 464 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FAM90A16PA6NEW6 464 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FAM159BA6NKW6 160 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FAM90A9PA6NNJ1 464 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FAM90A5PA8MXJ8 464 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 SAP18O00422 153 aaKnown RBP5.36□□□□□ -1.55
TDP1-215ENST00000556498 ZNF593O00488 134 aaPredicted RBP5.36□□□□□ -1.55
TDP1-215ENST00000556498 PIRO00625 290 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 TNFSF11O14788 317 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 XRCC3O43542 346 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 GSTZ1O43708 216 aaPredicted RBP5.36□□□□□ -1.55
TDP1-215ENST00000556498 OR1F1O43749 312 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 ZG16O60844 167 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 ALOX12BO75342 701 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 CDRT1O95170 752 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 TRGC2P03986 189 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 VTNP04004 478 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 KLK1P06870 262 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 CELA2AP08217 269 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FAM90A15PP0C7V4 464 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FAM90A14PP0C7W9 464 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FAM157CP0CG43 387 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 CT45A6P0DMU7 189 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 CT45A5P0DMU8 189 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 CT45A7P0DMV0 189 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FCARP24071 287 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 GDF5P43026 501 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 GPR1P46091 355 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 FUT6P51993 359 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 SLC35B1P78383 322 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 ZNF415Q09FC8 603 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 C1DQ13901 141 aaKnown RBP5.36□□□□□ -1.55
TDP1-215ENST00000556498 ENDOGQ14249 297 aaKnown RBP5.36□□□□□ -1.55
TDP1-215ENST00000556498 GINS1Q14691 196 aa5.36□□□□□ -1.55
TDP1-215ENST00000556498 ELOBQ15370 118 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms