RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 NSL1Q96IY1 281 aa8.04□□□□□ -1.12
SCFD1-220ENST00000556486 TEX12Q9BXU0 123 aa8.04□□□□□ -1.12
SCFD1-220ENST00000556486 ZNF556Q9HAH1 456 aa8.04□□□□□ -1.12
SCFD1-220ENST00000556486 SEBOXQ9HB31 216 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-220ENST00000556486 TCF19Q9Y242 345 aa8.04□□□□□ -1.12
SCFD1-220ENST00000556486 PIGLQ9Y2B2 252 aa8.04□□□□□ -1.12
SCFD1-220ENST00000556486 TBL2Q9Y4P3 447 aaKnown RBP8.04□□□□□ -1.12
SCFD1-220ENST00000556486 V9GYS6 101 aa8.04□□□□□ -1.12
SCFD1-220ENST00000556486 A6NDX4 124 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 CCDC182A6NF36 153 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 K7N7A8 449 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 ZNF737O75373 536 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 CCDC159P0C7I6 412 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 T-ENOLP0DO92 83 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 CCL1P22362 96 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 HAAOP46952 286 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 RIDAP52758 137 aaKnown RBP8.03□□□□□ -1.12
SCFD1-220ENST00000556486 EFNB1P98172 346 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 APOFQ13790 326 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 ZNF273Q14593 569 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 RNF151Q2KHN1 245 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 DMRTC1Q5HYR2 192 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 CLVS2Q5SYC1 327 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 ZNF684Q5T5D7 378 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 ZNF626Q68DY1 528 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 ELMOD2Q8IZ81 293 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 ABHD5Q8WTS1 349 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 CANT1Q8WVQ1 401 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 MALSU1Q96EH3 234 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 RNF125Q96EQ8 232 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 NRBF2Q96F24 287 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 MNTQ99583 582 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 PKIBQ9C010 78 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 KRT84Q9NSB2 600 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 PITPNC1Q9UKF7 332 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 U3KQK5 164 aa8.03□□□□□ -1.12
SCFD1-220ENST00000556486 KRTAP9-6A0A140TA67 174 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 A0A1B0GTI1 187 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 SYNGR1O43759 233 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 NXPH2O95156 264 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 CHRM2P08172 466 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 ZNF728P0DKX0 622 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 CCL3L1P16619 93 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 ZNF134P52741 427 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 CAPZA1P52907 286 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 HCCSP53701 268 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 RPS7P62081 194 aaKnown RBP8.02□□□□□ -1.13
SCFD1-220ENST00000556486 GNGT1P63211 74 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 MFGE8Q08431 387 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-220ENST00000556486 IL24Q13007 206 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 LDLRAD2Q5SZI1 272 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 CCDC121Q6ZUS5 278 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 MOB3CQ70IA8 216 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 RNF144BQ7Z419 303 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 HS3ST5Q8IZT8 346 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 DYNAPQ8N1N2 210 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 WFDC9Q8NEX5 89 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 OR2T27Q8NH04 317 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 RPS4Y2Q8TD47 263 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 CCDC124Q96CT7 223 aaKnown RBP8.02□□□□□ -1.13
SCFD1-220ENST00000556486 ZNF488Q96MN9 340 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 CNN2Q99439 309 aaKnown RBP8.02□□□□□ -1.13
SCFD1-220ENST00000556486 TAS2R1Q9NYW7 299 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 COPS3Q9UNS2 423 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 R4GMQ9 66 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 DSCAML1Q8TD84 2053 aa8.02□□□□□ -1.13
SCFD1-220ENST00000556486 FAM90A22PA8MWA6 464 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 LOC110117498-PIK3R3F6TDL0 507 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 PSMD9O00233 223 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 GNGT2O14610 69 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 CCR9P51686 369 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 ACTR3P61158 418 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 SLC35A2P78381 396 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 MEF2CQ06413 473 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-220ENST00000556486 SNAPC1Q16533 368 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 BAK1Q16611 211 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 MINOS1Q5TGZ0 78 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 TMEM236Q5W0B7 351 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 FAHD1Q6P587 224 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 ZNF322Q6U7Q0 402 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-220ENST00000556486 LHFPL4Q7Z7J7 247 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 COMMD2Q86X83 199 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 SPARTQ8N0X7 666 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 OR13D1Q8NGV5 346 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 ASCL2Q99929 193 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 PRRG3Q9BZD7 231 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 PRSS22Q9GZN4 317 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCFD1-220ENST00000556486 MINOS1-NBL1R4GNA1 71 aa8.01□□□□□ -1.13
SCFD1-220ENST00000556486 TCRBV3S1A0A5B6 114 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 E9PQ18 207 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 IGHV1-8P0DP01 117 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 JUNBP17275 347 aaPredicted RBP8□□□□□ -1.13
SCFD1-220ENST00000556486 PRKACGP22612 351 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 COX7A1P24310 79 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 AZGP1P25311 298 aaKnown RBP8□□□□□ -1.13
SCFD1-220ENST00000556486 CEBPDP49716 269 aaPredicted RBP8□□□□□ -1.13
SCFD1-220ENST00000556486 CRISP1P54107 249 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 ESRRGP62508 458 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 PTGES3Q15185 160 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms