RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 C16orf45Q96MC5 204 aaPredicted RBP2.92□□□□□ -1.94
ATXN3-234ENST00000555958 SH3GL3Q99963 347 aa2.92□□□□□ -1.94
ATXN3-234ENST00000555958 SLC30A2Q9BRI3 323 aa2.92□□□□□ -1.94
ATXN3-234ENST00000555958 NDUFAF3Q9BU61 184 aa2.92□□□□□ -1.94
ATXN3-234ENST00000555958 RSPO3Q9BXY4 272 aaPredicted RBP2.92□□□□□ -1.94
ATXN3-234ENST00000555958 EXD2Q9NVH0 621 aa2.92□□□□□ -1.94
ATXN3-234ENST00000555958 NMRK1Q9NWW6 199 aa2.92□□□□□ -1.94
ATXN3-234ENST00000555958 EHFQ9NZC4 300 aa2.92□□□□□ -1.94
ATXN3-234ENST00000555958 NINJ2Q9NZG7 142 aa2.92□□□□□ -1.94
ATXN3-234ENST00000555958 HDGFL3Q9Y3E1 203 aa2.92□□□□□ -1.94
ATXN3-234ENST00000555958 FRAS1Q86XX4 4008 aa2.92□□□□□ -1.94
ATXN3-234ENST00000555958 DOCK11Q5JSL3 2073 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 CFAP73A6NFT4 308 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 CEACAM18A8MTB9 384 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 LRRN3E7EW58 273 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 ERLIN1O75477 346 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 LYPLA1O75608 230 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 CYB5R3P00387 301 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 SEMG1P04279 462 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 OR12D1P0DN82 309 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 CD28P10747 220 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 PSG2P11465 335 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 CCNOP22674 350 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 RPS5P46782 204 aaKnown RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 CCT3P49368 545 aaKnown RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 KLF3P57682 345 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 MRPS11P82912 194 aaKnown RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 HOXC5Q00444 222 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 C2orf54Q08AI8 447 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 FUT5Q11128 374 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 GAMTQ14353 236 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 ZNF141Q15928 474 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 THEM4Q5T1C6 240 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 CASC10Q5T4H9 136 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 METTL11BQ5VVY1 283 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 LIPKQ5VXJ0 399 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 TNFAIP8L2Q6P589 184 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 LYPD2Q6UXB3 125 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 ZCCHC23Q6ZST2 131 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 EIF3MQ7L2H7 374 aaKnown RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 GRINAQ7Z429 371 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 CLECL1Q8IZS7 167 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 SLC35F6Q8N357 371 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 KRTCAP2Q8N6L1 136 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 CCNYL1Q8N7R7 359 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 ZSCAN4Q8NAM6 433 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 ZNF420Q8TAQ5 688 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 SYNPRQ8TBG9 265 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 MAGEE2Q8TD90 523 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 TMEM234Q8WY98 164 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 UPRTQ96BW1 309 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 DDIT4LQ96D03 193 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 TIMD4Q96H15 378 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 OR2M2Q96R28 347 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 TBX15Q96SF7 602 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 PPA2Q9H2U2 334 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 ZNF385DQ9H6B1 395 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 REEP4Q9H6H4 257 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 PATZ1Q9HBE1 687 aaKnown RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 TAS2R7Q9NYW3 318 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 TMEM216Q9P0N5 145 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 AURKCQ9UQB9 309 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 TRAPPC4Q9Y296 219 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 NPTNQ9Y639 398 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 STAB2Q8WWQ8 2551 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 NACAE9PAV3 2078 aa2.91□□□□□ -1.94
ATXN3-234ENST00000555958 NUP214P35658 2090 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-234ENST00000555958 STARD9Q9P2P6 4700 aa2.9□□□□□ -1.94
ATXN3-234ENST00000555958 IGHV2-70DA0A0C4DH43 119 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 CENPVL3A0A0U1RRI6 287 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 LCE6AA0A183 80 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 ZNF99A8MXY4 864 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-234ENST00000555958 RPL36A-HNRNPH2H7BZ11 118 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 IMPA2O14732 288 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 TM9SF1O15321 606 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 MGRN1O60291 552 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 EIF1BO60739 113 aaKnown RBP2.9□□□□□ -1.95
ATXN3-234ENST00000555958 RAB36O95755 333 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 RBP1P09455 135 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 LINC00032P0C843 101 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 PNMTP11086 282 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 ZNF250P15622 560 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 LCN1P31025 176 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 ACAA2P42765 397 aaKnown RBP2.9□□□□□ -1.95
ATXN3-234ENST00000555958 MAGEA4P43358 317 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 CAMLGP49069 296 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 SERPINB8P50452 374 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 ERFP50548 548 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 POLR2HP52434 150 aaKnown RBP2.9□□□□□ -1.95
ATXN3-234ENST00000555958 RPL38P63173 70 aaKnown RBP2.9□□□□□ -1.95
ATXN3-234ENST00000555958 LY6EQ16553 131 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 SYPL1Q16563 259 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 ARHGAP11BQ3KRB8 267 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 DLEU7Q6UYE1 221 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 IL34Q6ZMJ4 242 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 WDR88Q6ZMY6 472 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 C16orf62Q7Z3J2 963 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 C6orf120Q7Z4R8 191 aa2.9□□□□□ -1.95
ATXN3-234ENST00000555958 ABHD12BQ7Z5M8 362 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms