RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 CRIP3Q6Q6R5 217 aa17.06■□□□□ 0.32
FOXN3-209ENST00000555353 RNF144BQ7Z419 303 aa17.06■□□□□ 0.32
FOXN3-209ENST00000555353 MCFD2Q8NI22 146 aa17.06■□□□□ 0.32
FOXN3-209ENST00000555353 NRIP2Q9BQI9 281 aa17.06■□□□□ 0.32
FOXN3-209ENST00000555353 SLIRPQ9GZT3 109 aaKnown RBP17.06■□□□□ 0.32
FOXN3-209ENST00000555353 CST11Q9H112 138 aa17.06■□□□□ 0.32
FOXN3-209ENST00000555353 DNTTIP1Q9H147 329 aa17.06■□□□□ 0.32
FOXN3-209ENST00000555353 C7orf69Q9H7B7 122 aa17.06■□□□□ 0.32
FOXN3-209ENST00000555353 PTTG2Q9NZH5 202 aa17.06■□□□□ 0.32
FOXN3-209ENST00000555353 A3GALT2U3KPV4 340 aa17.06■□□□□ 0.32
FOXN3-209ENST00000555353 DVL1O14640 695 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 ANGPTL7O43827 346 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 CSTBP04080 98 aaKnown RBP17.05■□□□□ 0.32
FOXN3-209ENST00000555353 FAM157CP0CG43 387 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 ATPAF1Q5TC12 328 aaPredicted RBP17.05■□□□□ 0.32
FOXN3-209ENST00000555353 CD276Q5ZPR3 534 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 BTNL3Q6UXE8 466 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 ACP7Q6ZNF0 438 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 Q8IYB0 196 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 TEX29Q8N6K0 151 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 OR51D1Q8NGF3 324 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 ANGPTL6Q8NI99 470 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 SLC25A28Q96A46 364 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 POM121Q96HA1 1249 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 RHOFQ9HBH0 211 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 ETV7Q9Y603 341 aa17.05■□□□□ 0.32
FOXN3-209ENST00000555353 A0A075B6Q4 140 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 LOC105371242A0A075B767 164 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 ACAA1P09110 424 aaPredicted RBP17.04■□□□□ 0.32
FOXN3-209ENST00000555353 GABRA2P47869 451 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 BMXP51813 675 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 C2orf76Q3KRA6 126 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 ASCL4Q6XD76 172 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 BATF2Q8N1L9 274 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 FAM216BQ8N7L0 139 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 KCNG3Q8TAE7 436 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 RAB40AQ8WXH6 277 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 MED30Q96HR3 178 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 TMPRSS13Q9BYE2 586 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 MMP27Q9H306 513 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 IL36GQ9NZH8 169 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 SPATA2Q9UM82 520 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 INSIG2Q9Y5U4 225 aa17.04■□□□□ 0.32
FOXN3-209ENST00000555353 IGHV2-70DA0A0C4DH43 119 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 NDUFB3O43676 98 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 KDM4BO94953 1096 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 PSG2P11465 335 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 SNRPBP14678 240 aaKnown RBP17.03■□□□□ 0.32
FOXN3-209ENST00000555353 IL13RA1P78552 427 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 IKZF1Q13422 519 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 FAM189A2Q15884 450 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 SLC22A6Q4U2R8 563 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 LRRC10Q5BKY1 277 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 OR2W3Q7Z3T1 314 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 ST8SIA4Q92187 359 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 SLAMF9Q96A28 289 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 CEP19Q96LK0 163 aa17.03■□□□□ 0.32
FOXN3-209ENST00000555353 C6orf62Q9GZU0 229 aaPredicted RBP17.03■□□□□ 0.32
FOXN3-209ENST00000555353 A0A1B0GW55 424 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 HTR3BO95264 441 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 DUX4L2P0CJ85 424 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 DUX4L3P0CJ86 424 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 DUX4L4P0CJ87 422 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 DUX4L5P0CJ88 424 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 DUX4L6P0CJ89 424 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 DUX4L7P0CJ90 424 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 DUX4L9Q6RFH8 374 aaPredicted RBP17.02■□□□□ 0.32
FOXN3-209ENST00000555353 ZNF788Q6ZQV5 615 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 C1QL2Q7Z5L3 287 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 LGALS14Q8TCE9 139 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 NUDT16L1Q9BRJ7 211 aaKnown RBP17.02■□□□□ 0.32
FOXN3-209ENST00000555353 MTCH1Q9NZJ7 389 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 COMMD3Q9UBI1 195 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 DUX4Q9UBX2 424 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 AUP1Q9Y679 476 aa17.02■□□□□ 0.32
FOXN3-209ENST00000555353 IGKV1D-17A0A075B6S4 117 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 A0A0B4J203 849 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 RFPL4AA6NLU0 287 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 RFPL4AL1F8VTS6 287 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 RGS5O15539 181 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 ENSAO43768 121 aaKnown RBP17.02■□□□□ 0.31
FOXN3-209ENST00000555353 PAHP00439 452 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 GTF2F2P13984 249 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 AMY2BP19961 511 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 SERPINA2P20848 420 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 ERVK11-1P61568 191 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 PAX2Q02962 417 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 C11orf91Q3C1V1 193 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 FIP1L1Q6UN15 594 aaKnown RBP17.02■□□□□ 0.31
FOXN3-209ENST00000555353 MRPS24Q96EL2 167 aaKnown RBP17.02■□□□□ 0.31
FOXN3-209ENST00000555353 GAFA1Q96PS6 74 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 NXF2Q9GZY0 626 aaKnown RBP17.02■□□□□ 0.31
FOXN3-209ENST00000555353 HES4Q9HCC6 221 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 FBLN5Q9UBX5 448 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 ADAM30Q9UKF2 790 aa17.02■□□□□ 0.31
FOXN3-209ENST00000555353 IGKV1-12A0A0C4DH73 117 aa17.01■□□□□ 0.31
FOXN3-209ENST00000555353 C22orf46C9J442 243 aa17.01■□□□□ 0.31
FOXN3-209ENST00000555353 SIGLEC5O15389 551 aa17.01■□□□□ 0.31
FOXN3-209ENST00000555353 CRTAPO75718 401 aaPredicted RBP17.01■□□□□ 0.31
FOXN3-209ENST00000555353 ECDO95905 644 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms