RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 FGF7P21781 194 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 PIGPP57054 158 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 RND3P61587 244 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 GAMTQ14353 236 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 IL11RAQ14626 422 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 KISS1Q15726 138 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 ABCA11PQ4W5N1 156 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 TCEAL6Q6IPX3 200 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 SPNS3Q6ZMD2 512 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 GALNTL5Q7Z4T8 443 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 COMMD2Q86X83 199 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 CCDC71LQ8N9Z2 235 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 PP6455Q8WZ26 134 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 BOD1Q96IK1 185 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 GUCD1Q96NT3 240 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 SPACA5Q96QH8 159 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 CDX2Q99626 313 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 SLC25A31Q9H0C2 315 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 SH3BGRL3Q9H299 93 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 PTRH2Q9Y3E5 179 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 U3KQA8 63 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 TRIOO75962 3097 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 SPAG17Q6Q759 2223 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 A0A1W2PP11 408 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 SOD3P08294 240 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF728P0DKX0 622 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 OR5H8P0DN80 308 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF17P17021 662 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 CSNK1A1P48729 337 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF121P58317 390 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 ERVFRD-1P60508 538 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 LSM6P62312 80 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 EWSR1Q01844 656 aaKnown RBP eCLIP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 OR2T2Q6IF00 324 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 FBXL14Q8N1E6 418 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 HSD17B11Q8NBQ5 300 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 OR4D5Q8NGN0 318 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 OR2G3Q8NGZ4 309 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 BSCL2Q96G97 398 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 LURAP1Q96LR2 239 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 C11orf1Q9H5F2 150 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF701Q9NV72 531 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 DKKL1Q9UK85 242 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 ZDHHC8Q9ULC8 765 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 FER1L5A0AVI2 2057 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 TRBV24-1A0A075B6N3 115 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 TRAV1-1A0A0B4J248 108 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 SMCO3A2RU48 225 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 CDRT15L2A8MXV6 281 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 CYB5BO43169 146 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 C1QL1O75973 258 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 RNF224P0DH78 156 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 HOXA6P31267 233 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 GUCA1AP43080 201 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 HLA-DRB3P79483 266 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 H3F3AP84243 136 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 TLE4Q04727 773 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 BAXQ07812 192 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 HNF4GQ14541 408 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 JOSD1Q15040 202 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 EXT1Q16394 746 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 RNF144BQ7Z419 303 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 OR2C3Q8N628 320 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 OR10AD1Q8NGE0 317 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 RTN4IP1Q8WWV3 396 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 MEGF10Q96KG7 1140 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 RHOVQ96L33 236 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 SPIN2AQ99865 258 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 RARRES2Q99969 163 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 SPIN2BQ9BPZ2 258 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 GPR61Q9BZJ8 451 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 ACTR3CQ9C0K3 210 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 SMOC1Q9H4F8 434 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 AK3Q9UIJ7 227 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 RCL1Q9Y2P8 373 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 SIT1Q9Y3P8 196 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 WSB1Q9Y6I7 421 aa9.3□□□□□ -0.92
MTHFD1-210ENST00000555252 VCANP13611 3396 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 IGKV1-9A0A0C4DH69 117 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 A0A0U1RQV5 110 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 DHRS7CA6NNS2 312 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 VAMP5O95183 116 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 QDPRP09417 244 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 OR5AC1P0C628 307 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 ATP6V0CP27449 155 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 ICAM4Q14773 271 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 PCOLCEQ15113 449 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 AKR1C8PQ5T2L2 129 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 CDPF1Q6NVV7 123 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 MYO7BQ6PIF6 2116 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 FAM185AQ8N0U4 392 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 HAS2Q92819 552 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 MSI2Q96DH6 328 aaKnown RBP9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 FAM210BQ96KR6 192 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 PACRGQ96M98 296 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 CTDSP1Q9GZU7 261 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 PLEKHF2Q9H8W4 249 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 DCAF16Q9NXF7 216 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 V9GYS6 101 aa9.29□□□□□ -0.92
MTHFD1-210ENST00000555252 A0A1W2PNR3 127 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms