RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MARVELD1Q9BSK0 173 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 C1orf50Q9BV19 199 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 FRMD8P1Q9BZ68 369 aaPredicted RBP3□□□□□ -1.93
CKS1BP1-201ENST00000555221 TAS2R5Q9NYW4 299 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 SBF1O95248 1867 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 ANKRD31Q8N7Z5 1873 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 BDP1A6H8Y1 2624 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 DUOX1Q9NRD9 1551 aa3□□□□□ -1.93
CKS1BP1-201ENST00000555221 ANKRD11Q6UB99 2663 aaPredicted RBP2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 BRCA1P38398 1863 aaKnown RBP2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 KIF26AQ9ULI4 1882 aaPredicted RBP2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 TNRC6CQ9HCJ0 1690 aaKnown RBP2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 A8MWL6 223 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 SEC14L6B5MCN3 397 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 LGALS9O00182 355 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 GMDSO60547 372 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 ALOX12BO75342 701 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 LHBP01229 141 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 IGLV3-19P01714 112 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 RHOCP08134 193 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 OR5AL1P0C617 328 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 NELFEP18615 380 aaKnown RBP2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 CELP19835 753 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 MPV17P39210 176 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 PSMB2P49721 201 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 CMC4P56277 68 aaPredicted RBP2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 RPL31P62899 125 aaKnown RBP2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 ADIGQ0VDE8 80 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 BTN1A1Q13410 526 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 MAPRE2Q15555 327 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 KLHL12Q53G59 568 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 HHATQ5VTY9 493 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 RNF10Q8N5U6 811 aaKnown RBP2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 ASCC1Q8N9N2 400 aaKnown RBP2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 CHID1Q9BWS9 393 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 TBL1XR1Q9BZK7 514 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 PPIL1Q9Y3C6 166 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 MUC3AQ02505 3323 aa2.99□□□□□ -1.93
CKS1BP1-201ENST00000555221 CCDC171Q6TFL3 1326 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 ANKRD20A5PA0PJZ0 165 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 ZNF98A6NK75 572 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 J3QT63 122 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 OR7C2O60412 319 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 NTF3P20783 257 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 IL3RAP26951 378 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 DYNLL1P63167 89 aaKnown RBP2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 LAMTOR4Q0VGL1 99 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 CDNFQ49AH0 187 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 FAM27D1Q5T7N8 215 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 MIR7-3HGQ8N6C7 128 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 SLC7A11Q9UPY5 501 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 V9GYY9 64 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 LRRC37AA6NMS7 1700 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 DDX60Q8IY21 1712 aaKnown RBP2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 ZFHX4Q86UP3 3567 aa2.98□□□□□ -1.93
CKS1BP1-201ENST00000555221 LAMB2P55268 1798 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 CCDC88AQ3V6T2 1871 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 KIAA1551Q9HCM1 1747 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 CEACAM18A8MTB9 384 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 E7EWF7 191 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 PRMT5O14744 637 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 HTR2CP28335 458 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 MAD2L1BPQ15013 274 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 PRR9Q5T870 116 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 MED27Q6P2C8 311 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 CASP12Q6UXS9 341 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 OR6N2Q8NGY6 317 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 OR52N1Q8NH53 320 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 KLF14Q8TD94 323 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 CCDC12Q8WUD4 166 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 ZNF75CPQ92670 426 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 WDR34Q96EX3 536 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 ZFP3Q96NJ6 502 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 MAP1LC3CQ9BXW4 147 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 WDR55Q9H6Y2 383 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 VCX3AQ9NNX9 186 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 IL37Q9NZH6 218 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 RAB23Q9ULC3 237 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 TFR2Q9UP52 801 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 ENPP4Q9Y6X5 453 aa2.97□□□□□ -1.93
CKS1BP1-201ENST00000555221 IGHV3OR16-8A0A075B7F1 116 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 A0A0G2JMP0 313 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 A0A0X1KG70 313 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 FAM240AA0A1B0GVK7 77 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 TMEM72A0PK05 275 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 PRAMEF26H0Y7S4 382 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 RFXANKO14593 260 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 MPIP34949 423 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 GALR1P47211 349 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 IDH2P48735 452 aaKnown RBP2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 GRB2P62993 217 aaKnown RBP2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 IFFO1Q0D2I5 559 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 VAMP3Q15836 100 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 TAL2Q16559 108 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 NDUFAF6Q330K2 333 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 FBXL19-AS1Q494R0 122 aa2.96□□□□□ -1.94
CKS1BP1-201ENST00000555221 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms