RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SPHKAPQ2M3C7 1700 aa3.32□□□□□ -1.88
PSEN1-211ENST00000554995 E9PCH4 1651 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 ROBO1Q9Y6N7 1651 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 TRPM1Q7Z4N2 1603 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 CEP170BQ9Y4F5 1589 aaPredicted RBP3.31□□□□□ -1.88
PSEN1-211ENST00000554995 ARHGAP5Q13017 1502 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 SYCP2Q9BX26 1530 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 RTEL1-TNFRSF6BF6WH68 1400 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 TMEM72A0PK05 275 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 RBFOX3A6NFN3 312 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 OR2AT4A6NND4 320 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 TOR1AO14656 332 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 SCO1O75880 301 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 CDK14O94921 469 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 CYB5R3P00387 301 aaPredicted RBP3.31□□□□□ -1.88
PSEN1-211ENST00000554995 OR4Q2P0C623 313 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 CRATP43155 626 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 TAS2R43P59537 309 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 PFN3P60673 137 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 SKP1P63208 163 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 RAB31Q13636 194 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 PIGHQ14442 188 aaPredicted RBP3.31□□□□□ -1.88
PSEN1-211ENST00000554995 CEACAM21Q3KPI0 293 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 ACTBL2Q562R1 376 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 BHLHA15Q7RTS1 189 aaPredicted RBP3.31□□□□□ -1.88
PSEN1-211ENST00000554995 SPATA24Q86W54 205 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 BOD1L2Q8IYS8 172 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 ORMDL3Q8N138 153 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 OR2Z1Q8NG97 314 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 OR9A2Q8NGT5 310 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 NELFBQ8WX92 580 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 METTL8Q9H825 291 aaKnown RBP3.31□□□□□ -1.88
PSEN1-211ENST00000554995 SDHAF3Q9NRP4 125 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 CBY1Q9Y3M2 126 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 EP400Q96L91 3159 aa3.31□□□□□ -1.88
PSEN1-211ENST00000554995 STRCP1A6NGW2 1772 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 ZNF142P52746 1687 aaPredicted RBP3.3□□□□□ -1.88
PSEN1-211ENST00000554995 KDM5CP41229 1560 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 AGLP35573 1532 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 BCL9LQ86UU0 1499 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 RALGAPBQ86X10 1494 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 PLCH2O75038 1416 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 KIF15Q9NS87 1388 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 IGKV1-39P01597 117 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 IGKV1D-39P04432 117 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 IGKV5-2P06315 115 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 MUC1P15941 1255 aaPredicted RBP3.3□□□□□ -1.88
PSEN1-211ENST00000554995 NPY1RP25929 384 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 GCLMP48507 274 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 TTPAP49638 278 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 ACOT2P49753 483 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 CD302Q8IX05 232 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 ZNF101Q8IZC7 436 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 RNF10Q8N5U6 811 aaKnown RBP3.3□□□□□ -1.88
PSEN1-211ENST00000554995 ZNF420Q8TAQ5 688 aaPredicted RBP3.3□□□□□ -1.88
PSEN1-211ENST00000554995 PHF10Q8WUB8 498 aaKnown RBP3.3□□□□□ -1.88
PSEN1-211ENST00000554995 ORAOV1Q8WV07 137 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 LINC00167Q96N53 147 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 DOK1Q99704 481 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 MARVELD1Q9BSK0 173 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 SRRQ9GZT4 340 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 ASB7Q9H672 318 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 SND1-IT1Q9HBX3 110 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 DIABLOQ9NR28 239 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 OPN4Q9UHM6 478 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 RAB22AQ9UL26 194 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 C15orf41Q9Y2V0 281 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 KLF13Q9Y2Y9 288 aaPredicted RBP3.3□□□□□ -1.88
PSEN1-211ENST00000554995 INSIG2Q9Y5U4 225 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 PHLPP1O60346 1717 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 IFT172Q9UG01 1749 aa3.3□□□□□ -1.88
PSEN1-211ENST00000554995 SYNMO15061 1565 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 NWD1Q149M9 1564 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 PRDM15P57071 1507 aaPredicted RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 FAM135AQ9P2D6 1515 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 BLMP54132 1417 aaPredicted RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 SPATA31E1Q6ZUB1 1445 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 SCAPERQ9BY12 1400 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 ABCB11O95342 1321 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 KIF1BO60333 1816 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 IGHV1-3A0A0C4DH29 117 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 IGKV1-6A0A0C4DH72 117 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 A0A1B0GTI1 187 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 A0A1B0GXF2 115 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 BET1O15155 118 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 UBDO15205 165 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 CRXO43186 299 aaPredicted RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 ZNF324O75467 553 aaPredicted RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 MYO1DO94832 1006 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 SNAP29O95721 258 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 MAS1P04201 325 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 CDK1P06493 297 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 NELFEP18615 380 aaKnown RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 PSMB6P28072 239 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 ELF3P78545 371 aaPredicted RBP3.29□□□□□ -1.88
PSEN1-211ENST00000554995 PITPNAQ00169 270 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 EBI3Q14213 229 aa3.29□□□□□ -1.88
PSEN1-211ENST00000554995 ZNF404Q494X3 552 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms