RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 OR10G7Q8NGN6 311 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 ADIPOR1Q96A54 375 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 SH2D7A6NKC9 451 aaPredicted RBP12.34□□□□□ -0.43
VTI1B-204ENST00000554659 MEOX1P50221 254 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 ZNF345Q14585 488 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 RPEL1Q2QD12 228 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 MOB3BQ86TA1 216 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 OR5D13Q8NGL4 314 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 OR6S1Q8NH40 331 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 FAM60AQ9NP50 221 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 F5H697 171 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 FCGR3BO75015 233 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 CD1AP06126 327 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 OR11G2Q8NGC1 345 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 CA5BP1Q8WTZ4 195 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 ATP5SQ99766 215 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 GPR87Q9BY21 358 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 Q9N2K0 584 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 NAT8Q9UHE5 227 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 PCDHGA9Q9Y5G4 932 aaKnown RBP12.34□□□□□ -0.43
VTI1B-204ENST00000554659 NTN1O95631 604 aa12.33□□□□□ -0.43
VTI1B-204ENST00000554659 OPRK1P41145 380 aa12.33□□□□□ -0.43
VTI1B-204ENST00000554659 RHOBP62745 196 aa12.33□□□□□ -0.43
VTI1B-204ENST00000554659 ALKBH6Q3KRA9 238 aa12.33□□□□□ -0.43
VTI1B-204ENST00000554659 FAM109BQ6ICB4 259 aaPredicted RBP12.33□□□□□ -0.43
VTI1B-204ENST00000554659 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.43
VTI1B-204ENST00000554659 OR10D3Q8NH80 312 aa12.33□□□□□ -0.43
VTI1B-204ENST00000554659 SMIM12Q96EX1 92 aa12.33□□□□□ -0.43
VTI1B-204ENST00000554659 TMEM9BQ9NQ34 198 aa12.33□□□□□ -0.43
VTI1B-204ENST00000554659 TNFSF14O43557 240 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 POU2F2P09086 479 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 NUFIP2Q7Z417 695 aaKnown RBP12.33□□□□□ -0.44
VTI1B-204ENST00000554659 PPP1R3EQ9H7J1 279 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 SRD5A3Q9H8P0 318 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 ZFP64Q9NPA5 681 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 MBD1Q9UIS9 605 aaPredicted RBP12.33□□□□□ -0.44
VTI1B-204ENST00000554659 A0A1W2PPV9 198 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 LIPT2A6NK58 231 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 B4DEV8 164 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 POLR2GP62487 172 aaKnown RBP eCLIP12.33□□□□□ -0.44
VTI1B-204ENST00000554659 HYAL1Q12794 435 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 VASH2Q86V25 355 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 OR4F17Q8NGA8 305 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 MANBALQ9NQG1 85 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 ELF5Q9UKW6 265 aaPredicted RBP12.33□□□□□ -0.44
VTI1B-204ENST00000554659 MPC1Q9Y5U8 109 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 SOCS1O15524 211 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 CRISP2P16562 243 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 COL9A1P20849 921 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 CBLN2Q8IUK8 224 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 SLC52A3Q9NQ40 469 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 ST6GALNAC2Q9UJ37 374 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 PSG11Q9UQ72 335 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 WASHC3Q9Y3C0 194 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 CSN3P07498 182 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 SMIM6P0DI80 62 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 DAOP14920 347 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 DYNLT3P51808 116 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 LRRC10Q5BKY1 277 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 GUSBP11Q6P575 273 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 OR2Z1Q8NG97 314 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 OR13G1Q8NGZ3 307 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 ALX4Q9H161 411 aaPredicted RBP12.33□□□□□ -0.44
VTI1B-204ENST00000554659 WDR13Q9H1Z4 485 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 OR2D2Q9H210 308 aa12.33□□□□□ -0.44
VTI1B-204ENST00000554659 CYR61O00622 381 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 LANCL1O43813 399 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 IGF2P01344 180 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 HLA-GP17693 338 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 PSMB2P49721 201 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 PPP1CAP62136 330 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 SKP2Q13309 424 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 BSXQ3C1V8 233 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 WDR73Q6P4I2 378 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 ETV3LQ6ZN32 361 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 TBC1D26Q86UD7 250 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 LRP11Q86VZ4 500 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 CXorf67Q86X51 503 aaPredicted RBP12.32□□□□□ -0.44
VTI1B-204ENST00000554659 OR2T10Q8NGZ9 312 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 ASB5Q8WWX0 329 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 FKBP11Q9NYL4 201 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 TRAV8-7A0A075B6U6 113 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 MEX3AA1L020 520 aaKnown RBP12.32□□□□□ -0.44
VTI1B-204ENST00000554659 C5orf52A6NGY3 159 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 M0R2Z0 102 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 NDUFB3O43676 98 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 ZNF253O75346 499 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 GGTLC2Q14390 218 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 HIST3H3Q16695 136 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 Q3ZCU0 254 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.32□□□□□ -0.44
VTI1B-204ENST00000554659 RFESDQ8TAC1 157 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 PACRGQ96M98 296 aaPredicted RBP12.32□□□□□ -0.44
VTI1B-204ENST00000554659 SMCHD1A6NHR9 2005 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 SPAG17Q6Q759 2223 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 PRSS1P07477 247 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 ZNF25P17030 456 aaPredicted RBP12.32□□□□□ -0.44
VTI1B-204ENST00000554659 SULT1A2P50226 295 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 ELOBQ15370 118 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 MICBQ29980 383 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms