RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 COMMD3Q9UBI1 195 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 DUX4Q9UBX2 424 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 DAPK2Q9UIK4 370 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 IGHV3OR15-7A0A075B7D8 119 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 SMIM30A4D0T7 59 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 OOEPA6NGQ2 149 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 TBX1O43435 398 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 GMDSO60547 372 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 TOX4O94842 621 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 NDUFA7O95182 113 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 KNG1P01042 644 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 RAB3AP20336 220 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 BDKRB2P30411 391 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 GNALP38405 381 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 MAP2K3P46734 347 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 NPY4RP50391 375 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 ASPHD2Q6ICH7 369 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 KRT74Q7RTS7 529 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 LAX1Q8IWV1 398 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 OR1M1Q8NGA1 313 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 TRMT10AQ8TBZ6 339 aaKnown RBP8.72□□□□□ -1.01
SHMT2-215ENST00000554656 FGGYQ96C11 551 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 DIRAS2Q96HU8 199 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 CITED1Q99966 193 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 SOSTQ9BQB4 213 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 UQCC2Q9BRT2 126 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 PPP1R3EQ9H7J1 279 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 PLEKHA1Q9HB21 404 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 TMEM138Q9NPI0 162 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 C1orf123Q9NWV4 160 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 TAS2R4Q9NYW5 299 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 MRPL15Q9P015 296 aaKnown RBP8.72□□□□□ -1.01
SHMT2-215ENST00000554656 STEAP1Q9UHE8 339 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 V9GYH0 126 aa8.72□□□□□ -1.01
SHMT2-215ENST00000554656 IGHV1-69DA0A0B4J2H0 117 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 GGT3PA6NGU5 568 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.71□□□□□ -1.02
SHMT2-215ENST00000554656 SULT1B1O43704 296 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 HPGDSO60760 199 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 LHBP01229 141 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 IGHV1-69P01742 117 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 MAS1P04201 325 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 GRPP07492 148 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 TALDO1P37837 337 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 BPIFB3P59826 476 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 OR8B8Q15620 311 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 MIDNQ504T8 468 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 UBE2NLQ5JXB2 153 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 OLFML2AQ68BL7 652 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 COMMD2Q86X83 199 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 LYPD6Q86Y78 171 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 C11orf53Q8IXP5 236 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 TMEM86BQ8N661 226 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 GDPD1Q8N9F7 314 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 OR6M1Q8NGM8 313 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 OR4F5Q8NH21 305 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 ZNF671Q8TAW3 534 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 LHX4Q969G2 390 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 PTX4Q96A99 478 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 SGK3Q96BR1 496 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 ORAI1Q96D31 301 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 SEH1LQ96EE3 360 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 ADAT3Q96EY9 351 aaPredicted RBP8.71□□□□□ -1.02
SHMT2-215ENST00000554656 CPNE2Q96FN4 548 aaPredicted RBP8.71□□□□□ -1.02
SHMT2-215ENST00000554656 REEP6Q96HR9 211 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 FAM71F1Q96KD3 344 aaPredicted RBP8.71□□□□□ -1.02
SHMT2-215ENST00000554656 LYZL4Q96KX0 146 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 CHST5Q9GZS9 411 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 SLC22A4Q9H015 551 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 ABCG5Q9H222 651 aa8.71□□□□□ -1.02
SHMT2-215ENST00000554656 NOP16Q9Y3C1 178 aaKnown RBP8.71□□□□□ -1.02
SHMT2-215ENST00000554656 TRAV38-1A0A0B4J264 116 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 A0A0U1RQK1 487 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 hCG_38984A0A1B0GV85 526 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 FABP12A6NFH5 140 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 A6NLC8 198 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 J3QRK9 145 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 DVL1O14640 695 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 GPR137BO60478 399 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 UPK1BO75841 260 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 IGHV4-59P01825 116 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 SLC2A2P11168 524 aaPredicted RBP8.7□□□□□ -1.02
SHMT2-215ENST00000554656 HTR2CP28335 458 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 MNDAP41218 407 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 DLX1P56177 255 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 ARF6P62330 175 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 PRB3Q04118 309 aaPredicted RBP8.7□□□□□ -1.02
SHMT2-215ENST00000554656 RIPPLY1Q0D2K3 151 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 RAB11BQ15907 218 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 TEX36Q5VZQ5 186 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 CD276Q5ZPR3 534 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 CNIH2Q6PI25 160 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 BTN2A1Q7KYR7 527 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 SAMD12Q8N8I0 201 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 C15orf40Q8WUR7 153 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 SRRQ9GZT4 340 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 BEX1Q9HBH7 125 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 N6AMT1Q9Y5N5 214 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms