RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ASB17Q8WXJ9 295 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 PIGCQ92535 297 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ITFG2Q969R8 447 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 C12orf43Q96C57 262 aaKnown RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 CENPNQ96H22 339 aaPredicted RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 FAM71F1Q96KD3 344 aaPredicted RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 TECTBQ96PL2 329 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 GAFA1Q96PS6 74 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 RAB3IPQ96QF0 476 aaPredicted RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 IL4I1Q96RQ9 567 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 CCL13Q99616 98 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 PKP2Q99959 881 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 APOL4Q9BPW4 351 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 RTL8AQ9BWD3 113 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 OSBPL10Q9BXB5 764 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 MROQ9BYG7 248 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 SIRPDQ9H106 197 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 WDR13Q9H1Z4 485 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 SEMA6AQ9H2E6 1030 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 OR51I2Q9H344 312 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 MOB1AQ9H8S9 216 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 PLEKHA2Q9HB19 425 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ABCB9Q9NP78 766 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 GPR84Q9NQS5 396 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 CLN6Q9NWW5 311 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 USE1Q9NZ43 259 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ERVK-18Q9QC07 812 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 NUFIP1Q9UHK0 495 aaKnown RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF391Q9UJN7 358 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF222Q9UK12 451 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 IKZF2Q9UKS7 526 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 TMEM14AQ9Y6G1 99 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 R4GMQ9 66 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 V9GYS6 101 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 TENM1Q9UKZ4 2725 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 A0A1B0GTI1 187 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 TMEM269A0A1B0GVZ9 245 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 FAM90A20PA6NIJ5 464 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 OR5B21A6NL26 309 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF670-ZNF695F2Z2N8 137 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 LOC110117498-PIK3R3F6TDL0 507 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 J3QRE1 110 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 HSPB6O14558 160 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 EI24O14681 340 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 SIGLEC5O15389 551 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 RHBDL1O75783 438 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 CSTBP04080 98 aaKnown RBP3.39□□□□□ -1.87
VTI1B-203ENST00000554636 LIPFP07098 398 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 CSF1P09603 554 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 ATP6V1B1P15313 513 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 MUC1P15941 1255 aaPredicted RBP3.39□□□□□ -1.87
VTI1B-203ENST00000554636 PRTN3P24158 256 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 MTNR1AP48039 350 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 TGM4P49221 684 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 GPM6AP51674 278 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 GMFBP60983 142 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 CXCR4P61073 352 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 ISL1P61371 349 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 GNG3P63215 75 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 ACTG1P63261 375 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF85Q03923 595 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 BAMBIQ13145 260 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 TMED1Q13445 227 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 BLMHQ13867 455 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 DGUOKQ16854 277 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 MICBQ29980 383 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 DEFB112Q30KQ8 113 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 DMRTC1Q5HYR2 192 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 BCL2L15Q5TBC7 163 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 PLCXD3Q63HM9 321 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 KCTD18Q6PI47 426 aaPredicted RBP3.39□□□□□ -1.87
VTI1B-203ENST00000554636 BRD3OSQ6XYD6 125 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 KCTD8Q6ZWB6 473 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 BTN2A1Q7KYR7 527 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 CATSPERDQ86XM0 798 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 ELMOD2Q8IZ81 293 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 PRSS35Q8N3Z0 413 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 POC1AQ8NBT0 407 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 SCCPDHQ8NBX0 429 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 LY6G5BQ8NDX9 201 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 OR51G2Q8NGK0 314 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 ANGPTL6Q8NI99 470 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 C8orf46Q8TAG6 207 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 FAM81AQ8TBF8 368 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 ST8SIA4Q92187 359 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 TAF15Q92804 592 aaKnown RBP eCLIP3.39□□□□□ -1.87
VTI1B-203ENST00000554636 RNF170Q96K19 258 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 WDFY2Q96P53 400 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 DUX5Q96PT3 197 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 MBOAT4Q96T53 435 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 TBX5Q99593 518 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 RBM4BQ9BQ04 359 aaKnown RBP3.39□□□□□ -1.87
VTI1B-203ENST00000554636 PCGF1Q9BSM1 259 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 DCTN5Q9BTE1 182 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 DNTTIP1Q9H147 329 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 RIBC2Q9H4K1 309 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 GPR173Q9NS66 373 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 SNTG1Q9NSN8 517 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 NLKQ9UBE8 527 aa3.39□□□□□ -1.87
VTI1B-203ENST00000554636 WARS2Q9UGM6 360 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms