RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 MNDAP41218 407 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 OR3A1P47881 315 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 RBP2P50120 134 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 GNGT1P63211 74 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 PRAMEF5Q5TYX0 476 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 UNQ9370/PRO34162Q6UXP9 181 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 DNAAF1Q8NEP3 725 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 CORO2AQ92828 525 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 NRBF2Q96F24 287 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 RBFOX1Q9NWB1 397 aaKnown RBP19.25■□□□□ 0.67
FOXA1-204ENST00000554607 IL36RNQ9UBH0 155 aa19.25■□□□□ 0.67
FOXA1-204ENST00000554607 OOSP1A8MZH6 123 aa19.24■□□□□ 0.67
FOXA1-204ENST00000554607 FAM107AO95990 144 aa19.24■□□□□ 0.67
FOXA1-204ENST00000554607 FAM106CPP0CH98 169 aa19.24■□□□□ 0.67
FOXA1-204ENST00000554607 CD34P28906 385 aa19.24■□□□□ 0.67
FOXA1-204ENST00000554607 SLC6A1P30531 599 aa19.24■□□□□ 0.67
FOXA1-204ENST00000554607 NPBWR2P48146 333 aa19.24■□□□□ 0.67
FOXA1-204ENST00000554607 PRRX1P54821 245 aa19.24■□□□□ 0.67
FOXA1-204ENST00000554607 KPNB1Q14974 876 aaKnown RBP19.24■□□□□ 0.67
FOXA1-204ENST00000554607 AADACL4Q5VUY2 407 aa19.24■□□□□ 0.67
FOXA1-204ENST00000554607 BCDIN3DQ7Z5W3 292 aaKnown RBP19.24■□□□□ 0.67
FOXA1-204ENST00000554607 PP6455Q8WZ26 134 aa19.24■□□□□ 0.67
FOXA1-204ENST00000554607 SH2D7A6NKC9 451 aaPredicted RBP19.23■□□□□ 0.67
FOXA1-204ENST00000554607 H3BSH0 61 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 BUB1B-PAK6H3BSN5 160 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 SH2D1BO14796 132 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 ATP8B1O43520 1251 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 ENTPD6O75354 484 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 PRKACAP17612 351 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 BCL3P20749 454 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 THBS3P49746 956 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 TPTE2P1Q5T6R2 138 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 BAIAP2L2Q6UXY1 529 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 GID4Q8IVV7 300 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 TCEANCQ8N8B7 351 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 TMEM163Q8TC26 289 aa19.23■□□□□ 0.67
FOXA1-204ENST00000554607 NHLRC4P0CG21 123 aaPredicted RBP19.22■□□□□ 0.67
FOXA1-204ENST00000554607 RPL23AP62750 156 aaKnown RBP19.22■□□□□ 0.67
FOXA1-204ENST00000554607 EFNB1P98172 346 aa19.22■□□□□ 0.67
FOXA1-204ENST00000554607 HLA-DRB5Q30154 266 aa19.22■□□□□ 0.67
FOXA1-204ENST00000554607 FAHD1Q6P587 224 aa19.22■□□□□ 0.67
FOXA1-204ENST00000554607 ETV3LQ6ZN32 361 aa19.22■□□□□ 0.67
FOXA1-204ENST00000554607 OR4D6Q8NGJ1 314 aa19.22■□□□□ 0.67
FOXA1-204ENST00000554607 THTPAQ9BU02 230 aa19.22■□□□□ 0.67
FOXA1-204ENST00000554607 EXOSC4Q9NPD3 245 aaKnown RBP19.22■□□□□ 0.67
FOXA1-204ENST00000554607 ZFP57Q9NU63 452 aa19.22■□□□□ 0.67
FOXA1-204ENST00000554607 MOB4Q9Y3A3 225 aa19.22■□□□□ 0.67
FOXA1-204ENST00000554607 HSPE1-MOB4S4R3N1 261 aa19.22■□□□□ 0.67
FOXA1-204ENST00000554607 KIAA2026Q5HYC2 2103 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 METTL15A6NJ78 407 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 SIRPB1O00241 398 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 FKBP6O75344 327 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 SULT1C4O75897 302 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 MYCNOSP40205 109 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 POU3F4P49335 361 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 SNU13P55769 128 aaKnown RBP19.21■□□□□ 0.67
FOXA1-204ENST00000554607 MTCP1P56278 107 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 SSX6Q7RTT6 188 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 THNSL2Q86YJ6 484 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 CHPT1Q8WUD6 406 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 ZNF286AQ9HBT8 521 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 HMG20AQ9NP66 347 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 PCDHB16Q9NRJ7 776 aa19.21■□□□□ 0.67
FOXA1-204ENST00000554607 FAM172BPA6NC97 362 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 LY6LH3BQJ8 138 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 OR2H2O95918 312 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 OR2T7P0C7T2 308 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 PRKACBP22694 351 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 PTGFRP43088 359 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 DAPP51397 102 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 RNF144BQ7Z419 303 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 ZNF329Q86UD4 541 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 SPATA24Q86W54 205 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 TBX5Q99593 518 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 WARS2Q9UGM6 360 aaKnown RBP19.2■□□□□ 0.66
FOXA1-204ENST00000554607 GSTK1Q9Y2Q3 226 aa19.2■□□□□ 0.66
FOXA1-204ENST00000554607 A0A087X0M5 115 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 A0A1B0GX30 115 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 UBCP0CG48 685 aaKnown RBP19.19■□□□□ 0.66
FOXA1-204ENST00000554607 T-ENOLP0DO92 83 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 CALCBP10092 127 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 LMO1P25800 156 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 OR3A4PP47883 348 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 GLIPR1P48060 266 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 DGCR2P98153 550 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 AESQ08117 197 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 LHFPL2Q6ZUX7 228 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 OR2W3Q7Z3T1 314 aa19.19■□□□□ 0.66
FOXA1-204ENST00000554607 LOC107986453A0A1B0GWG9 222 aa19.18■□□□□ 0.66
FOXA1-204ENST00000554607 A0A1W2PQL4 384 aaPredicted RBP19.18■□□□□ 0.66
FOXA1-204ENST00000554607 ODAMA1E959 279 aa19.18■□□□□ 0.66
FOXA1-204ENST00000554607 NUDT19A8MXV4 375 aa19.18■□□□□ 0.66
FOXA1-204ENST00000554607 M0R129 80 aa19.18■□□□□ 0.66
FOXA1-204ENST00000554607 CCDC159P0C7I6 412 aa19.18■□□□□ 0.66
FOXA1-204ENST00000554607 GDNFP39905 211 aa19.18■□□□□ 0.66
FOXA1-204ENST00000554607 PDZK1IP1Q13113 114 aa19.18■□□□□ 0.66
FOXA1-204ENST00000554607 RBM39Q14498 530 aaKnown RBP19.18■□□□□ 0.66
FOXA1-204ENST00000554607 RPEQ96AT9 228 aa19.18■□□□□ 0.66
FOXA1-204ENST00000554607 IL4I1Q96RQ9 567 aa19.18■□□□□ 0.66
FOXA1-204ENST00000554607 FAM90A18PA6NE21 464 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms