RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 IRF3Q14653 427 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 CDK5R1Q15078 307 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 SPHARQ15513 63 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 AANATQ16613 207 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 HCP5Q6MZN7 132 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 GDPD3Q7L5L3 318 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 OR8H2Q8N162 312 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 FAM58AQ8N1B3 248 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 BATF2Q8N1L9 274 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 SVOPQ8N4V2 548 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 C11orf42Q8N5U0 333 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 ASCC1Q8N9N2 400 aaKnown RBP7.12□□□□□ -1.27
ACTN1-213ENST00000554508 ZSCAN4Q8NAM6 433 aaPredicted RBP7.12□□□□□ -1.27
ACTN1-213ENST00000554508 ZNF485Q8NCK3 441 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 BEND2Q8NDZ0 799 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 OR4M1Q8NGD0 313 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 OR5D14Q8NGL3 314 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 OR13C3Q8NGS6 347 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 TSEN15Q8WW01 171 aaKnown RBP7.12□□□□□ -1.27
ACTN1-213ENST00000554508 TAF15Q92804 592 aaKnown RBP eCLIP7.12□□□□□ -1.27
ACTN1-213ENST00000554508 EMG1Q92979 244 aaKnown RBP7.12□□□□□ -1.27
ACTN1-213ENST00000554508 SLAMF9Q96A28 289 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 OPALINQ96PE5 141 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 OR5M11Q96RB7 305 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 PDCD1LG2Q9BQ51 273 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 RHOFQ9HBH0 211 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 VPREB3Q9UKI3 123 aa7.12□□□□□ -1.27
ACTN1-213ENST00000554508 SIRT4Q9Y6E7 314 aaPredicted RBP7.12□□□□□ -1.27
ACTN1-213ENST00000554508 OGG1O15527 345 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 MRPS14O60783 128 aaKnown RBP7.11□□□□□ -1.27
ACTN1-213ENST00000554508 INMTO95050 263 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 TNFAIP8O95379 198 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 HAND1O96004 215 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 ZNF728P0DKX0 622 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 PRKACAP17612 351 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 CELP19835 753 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 BCL3P20749 454 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 NPBWR2P48146 333 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 POU3F4P49335 361 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 LGALS4P56470 323 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 EMX1Q04741 257 aaPredicted RBP7.11□□□□□ -1.27
ACTN1-213ENST00000554508 PDZK1IP1Q13113 114 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 ZNF273Q14593 569 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 ZNF146Q15072 292 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 TAF9Q16594 264 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 KCTD21Q4G0X4 260 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 SPIN3Q5JUX0 258 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 PRR31Q5SQ13 230 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 DMKNQ6E0U4 476 aaPredicted RBP7.11□□□□□ -1.27
ACTN1-213ENST00000554508 C17orf107Q6ZR85 190 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 SERPINA12Q8IW75 414 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 SAXO1Q8IYX7 474 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 SPARTQ8N0X7 666 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 PNKDQ8N490 385 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 OR51A4Q8NGJ6 313 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 OR13C9Q8NGT0 318 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 OR10AC1Q8NH08 325 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 PPP1R35Q8TAP8 253 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 GHSRQ92847 366 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 SMIM19Q96E16 107 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 SSX3Q99909 188 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 ZCCHC4Q9H5U6 513 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 C16orf95Q9H693 158 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 DHDHQ9UQ10 334 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 LSM2Q9Y333 95 aaKnown RBP7.11□□□□□ -1.27
ACTN1-213ENST00000554508 RNF114Q9Y508 228 aa7.11□□□□□ -1.27
ACTN1-213ENST00000554508 MGAM2Q2M2H8 2515 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 hADV38S2A0JD32 116 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 TMEM82A0PJX8 343 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 FUOMA2VDF0 154 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 SH2D1BO14796 132 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 TSPAN9O75954 239 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 CLPXO76031 633 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 CCL3L1P16619 93 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 ERP29P30040 261 aaKnown RBP7.1□□□□□ -1.27
ACTN1-213ENST00000554508 SOX2P48431 317 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 DLX6P56179 175 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 EDDM3BP56851 147 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 BDH1Q02338 343 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 DOC2BQ14184 412 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 TBCEQ15813 527 aaPredicted RBP7.1□□□□□ -1.27
ACTN1-213ENST00000554508 LRRC75BQ2VPJ9 315 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 DHRS7BQ6IAN0 325 aaPredicted RBP7.1□□□□□ -1.27
ACTN1-213ENST00000554508 ZNF773Q6PK81 442 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 Q6ZSV7 163 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 ZNF367Q7RTV3 350 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 PARP16Q8N5Y8 322 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 DTX3Q8N9I9 347 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 OR13D1Q8NGV5 346 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 LINC01006Q8NI28 216 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 GPR148Q8TDV2 347 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 WFDC12Q8WWY7 111 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 UFD1Q92890 307 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 AJUBAQ96IF1 538 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 ZNF714Q96N38 554 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 MGLLQ99685 303 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 HMG20AQ9NP66 347 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 ACOT13Q9NPJ3 140 aa7.1□□□□□ -1.27
ACTN1-213ENST00000554508 RBFOX1Q9NWB1 397 aaKnown RBP7.1□□□□□ -1.27
ACTN1-213ENST00000554508 ZNF281Q9Y2X9 895 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms