RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 COX18Q8N8Q8 333 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 GATD1Q8NB37 220 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 PXT1Q8NFP0 134 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 OR4C13Q8NGP0 309 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 NEK7Q8TDX7 302 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 FAM172AQ8WUF8 416 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 RERGQ96A58 199 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-211ENST00000554437 NRIP2Q9BQI9 281 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 TPK1Q9H3S4 243 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 SLCO1B3Q9NPD5 702 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 FAM49BQ9NUQ9 324 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 GID8Q9NWU2 228 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 RAB26Q9ULW5 256 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 HES2Q9Y543 173 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 WSB1Q9Y6I7 421 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 FLT4P35916 1363 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 NACAE9PAV3 2078 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 RIMS2Q9UQ26 1411 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 CAMTA1Q9Y6Y1 1673 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 SNAPC4Q5SXM2 1469 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 ROCK1Q13464 1354 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 IGHV1-69DA0A0B4J2H0 117 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 A0A0G2JN53 185 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 I3L4J1 428 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 PEX7O00628 323 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 NDUFS5O43920 106 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 GIPP09681 153 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-211ENST00000554437 CD70P32970 193 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 RCVRNP35243 200 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 TGFBR2P37173 567 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 CDKN2BP42772 138 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 SULT1A1P50225 295 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 SULT1A2P50226 295 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 PPOXP50336 477 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 CDKN2DP55273 166 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 UBE2NP61088 152 aaKnown RBP3.18□□□□□ -1.9
SCFD1-211ENST00000554437 SMAGPQ0VAQ4 97 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 ALX1Q15699 326 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 MAPK14Q16539 360 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 METTL21CQ5VZV1 264 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 TNFAIP8L2Q6P589 184 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-211ENST00000554437 STRADAQ7RTN6 431 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 TAC4Q86UU9 113 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 NIT1Q86X76 327 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 GPR32P1Q8NGA4 272 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 OR4P4Q8NGL7 312 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 ASB13Q8WXK3 278 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 PPCDCQ96CD2 204 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 TMA16Q96EY4 203 aaKnown RBP3.18□□□□□ -1.9
SCFD1-211ENST00000554437 IMP4Q96G21 291 aaKnown RBP3.18□□□□□ -1.9
SCFD1-211ENST00000554437 QKIQ96PU8 341 aaKnown RBP eCLIP3.18□□□□□ -1.93e-7■■■■■ 29.3
SCFD1-211ENST00000554437 DOK1Q99704 481 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 EMC6Q9BV81 110 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 SUCNR1Q9BXA5 334 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 SLC25A2Q9BXI2 301 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 OR11A1Q9GZK7 315 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 TLNRD1Q9H1K6 362 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 HEBP1Q9NRV9 189 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 ZNF226Q9NYT6 803 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 ZNF223Q9UK11 482 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-211ENST00000554437 SIGLEC7Q9Y286 467 aa3.18□□□□□ -1.9
SCFD1-211ENST00000554437 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.18□□□□□ -1.9
SCFD1-211ENST00000554437 F11RQ9Y624 299 aaKnown RBP3.18□□□□□ -1.9
SCFD1-211ENST00000554437 EIF3AQ14152 1382 aaKnown RBP3.17□□□□□ -1.9
SCFD1-211ENST00000554437 SMIM26A0A096LP01 95 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 LOC105371267A0A1B0GV96 52 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 ARGFXA6NJG6 315 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 PSMD12O00232 456 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-211ENST00000554437 MOSP00540 346 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 AKR1C4P17516 323 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 MYL12AP19105 171 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 ALOX5APP20292 161 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 TALDO1P37837 337 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 LGALS7P47929 136 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 SYNJ2BPP57105 145 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 SLC7A9P82251 487 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 FMODQ06828 376 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 OR2F1Q13607 317 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 PTGES3Q15185 160 aaKnown RBP3.17□□□□□ -1.9
SCFD1-211ENST00000554437 GUCA2BQ16661 112 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 HIST3H3Q16695 136 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 TMEM236Q5W0B7 351 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 FBXW9Q5XUX1 488 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 PLET1Q6UQ28 207 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 CLEC19AQ6UXS0 136 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 SPNS3Q6ZMD2 512 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 RASSF6Q6ZTQ3 369 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 TMED4Q7Z7H5 227 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 ZNF429Q86V71 674 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 COMMD7Q86VX2 200 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 CYGBQ8WWM9 190 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 TMEM159Q96B96 161 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 SMARCD1Q96GM5 515 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 TSGA10Q9BZW7 698 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 FBXL15Q9H469 300 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 DMAC2Q9NW81 257 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 PCYOX1Q9UHG3 505 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 LSM5Q9Y4Y9 91 aaKnown RBP3.17□□□□□ -1.9
SCFD1-211ENST00000554437 DENND4AQ7Z401 1863 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms