RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 RDH12Q96NR8 316 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 TECTBQ96PL2 329 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 NEDD4LQ96PU5 975 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 CPXM1Q96SM3 734 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 SLC6A7Q99884 636 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 AGPAT1Q99943 283 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 TIMM29Q9BSF4 260 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 SUCNR1Q9BXA5 334 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 LHX9Q9NQ69 397 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 STARD5Q9NSY2 213 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 POMT2Q9UKY4 750 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 STYXL1Q9Y6J8 313 aa3.7□□□□□ -1.82
ATXN3-225ENST00000554214 SETD2Q9BYW2 2564 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 TLN1Q9Y490 2541 aaKnown RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 TRAV8-7A0A075B6U6 113 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 TRAV39A0A0B4J263 110 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 A0A1B0GTI1 187 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 B4DXG7 233 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 C9JVG2 144 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 SLC17A3O00476 420 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 UBFD1O14562 309 aaKnown RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 GALR3O60755 368 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 GLSO94925 669 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 CST4P01036 141 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 GCGP01275 180 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 IGLV3-19P01714 112 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 C1QCP02747 245 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 NMBP08949 121 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 HIST1H2AGP0C0S8 130 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 GP9P14770 177 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 FOLR1P15328 257 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 F2RP25116 425 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 DUTP33316 252 aaKnown RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 DLSTP36957 453 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 FRKP42685 505 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 UQCRFS1P47985 274 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 CSNK1A1P48729 337 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 RAB7AP51149 207 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 SGSHP51688 502 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 AQP5P55064 265 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 MTCP1P56278 107 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 OR2B8PP59922 312 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 RANP62826 216 aaKnown RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 HBA1P69905 142 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 BTN3A2P78410 334 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 ADARB1P78563 741 aaKnown RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 FKBP3Q00688 224 aaKnown RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 PRPSAP1Q14558 356 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 TSNQ15631 228 aaKnown RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 HMGN3Q15651 99 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 MAPK14Q16539 360 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 PCK2Q16822 640 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 TIMM50Q3ZCQ8 353 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 FAM106AQ4KMX7 169 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 OCIAD2Q56VL3 154 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 XKR7Q5GH72 579 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 GCSAMLQ5JQS6 135 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 HIST2H2AA3Q6FI13 130 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 WDR59Q6PJI9 974 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 PAQR9Q6ZVX9 377 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 TMUB2Q71RG4 321 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 C6orf120Q7Z4R8 191 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 ABI3BPQ7Z7G0 1075 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 BOD1L2Q8IYS8 172 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 SLC34A3Q8N130 599 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 SLC25A45Q8N413 288 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 SAMD12Q8N8I0 201 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 DUSP18Q8NEJ0 188 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 OR1K1Q8NGR3 316 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 OR13C8Q8NGS7 320 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 SKA2Q8WVK7 121 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-225ENST00000554214 TMEM159Q96B96 161 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 PYCR2Q96C36 320 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 ASB9Q96DX5 294 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 SMARCD1Q96GM5 515 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 OR2M4Q96R27 311 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 OR52E6Q96RD3 313 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 ATG101Q9BSB4 218 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 PBDC1Q9BVG4 233 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 SNHG12Q9BXW3 62 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 MED28Q9H204 178 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 ABCG5Q9H222 651 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 PLEKHJ1Q9NW61 149 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 OPTCQ9UBM4 332 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 FBXL4Q9UKA2 621 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 TFR2Q9UP52 801 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 KLK4Q9Y5K2 254 aa3.69□□□□□ -1.82
ATXN3-225ENST00000554214 CSMD2Q7Z408 3487 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 A0A087WZ39 114 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 IGHV3-38A0A0C4DH36 116 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 IQCMA0A1B0GVH7 501 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 OR5H14A6NHG9 310 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 EFCAB9A8MZ26 197 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 G3V3Y1 287 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 PPP1R2P9O14990 202 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 MAGEB4O15481 346 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-225ENST00000554214 FABP7O15540 132 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 DUX1O43812 170 aa3.68□□□□□ -1.82
ATXN3-225ENST00000554214 OR2T1O43869 369 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms