RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 PTPN13Q12923 2485 aa6.44□□□□□ -1.38
TDP1-209ENST00000554180 HRNRQ86YZ3 2850 aaPredicted RBP6.44□□□□□ -1.38
TDP1-209ENST00000554180 CACNA1DQ01668 2161 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 TRAV24A0A0B4J272 114 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 MEIOCA2RUB1 952 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 OR2AT4A6NND4 320 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 MCRIP1C9JLW8 97 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 TMEM178BH3BS89 294 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.43□□□□□ -1.38
TDP1-209ENST00000554180 H7C1Q1 480 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 DEGS1O15121 323 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 ORC5O43913 435 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 RBBP9O75884 186 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 OR2H2O95918 312 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 CSF1P09603 554 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 CD3GP09693 182 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 ZNF44P15621 663 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 EGR1P18146 543 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 TBPP20226 339 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 DTYMKP23919 212 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 LMO1P25800 156 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 RCVRNP35243 200 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 GDNFP39905 211 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 IFITM3Q01628 133 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 PAX5Q02548 391 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 DYRK1AQ13627 763 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 ARFRP1Q13795 201 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 MICBQ29980 383 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 HFEQ30201 348 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 ATAD3CQ5T2N8 411 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 SP5Q6BEB4 398 aaPredicted RBP6.43□□□□□ -1.38
TDP1-209ENST00000554180 C6orf201Q7Z4U5 140 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 ZCCHC24Q8N2G6 241 aaKnown RBP6.43□□□□□ -1.38
TDP1-209ENST00000554180 TOMM5Q8N4H5 51 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 NUDCD2Q8WVJ2 157 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 GCDHQ92947 438 aaPredicted RBP6.43□□□□□ -1.38
TDP1-209ENST00000554180 C14orf79Q96F83 325 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 VRK1Q99986 396 aaPredicted RBP6.43□□□□□ -1.38
TDP1-209ENST00000554180 SULT4A1Q9BR01 284 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 OCSTAMPQ9BR26 566 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 C7orf50Q9BRJ6 194 aaKnown RBP6.43□□□□□ -1.38
TDP1-209ENST00000554180 DPCDQ9BVM2 203 aaPredicted RBP6.43□□□□□ -1.38
TDP1-209ENST00000554180 CACNG6Q9BXT2 260 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 CHST6Q9GZX3 395 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 DNTTIP1Q9H147 329 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 RIMS4Q9H426 269 aaPredicted RBP6.43□□□□□ -1.38
TDP1-209ENST00000554180 PLEKHF2Q9H8W4 249 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 ZMAT3Q9HA38 289 aaKnown RBP6.43□□□□□ -1.38
TDP1-209ENST00000554180 UBTD1Q9HAC8 227 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 C12orf4Q9NQ89 552 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 ANAPC10Q9UM13 185 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 LAMP3Q9UQV4 416 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 WIPI2Q9Y4P8 454 aa6.43□□□□□ -1.38
TDP1-209ENST00000554180 FASNP49327 2511 aaKnown RBP6.42□□□□□ -1.38
TDP1-209ENST00000554180 TRBV6-6A0A0A6YYG2 114 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 TRAV38-1A0A0B4J264 116 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 ANKRD20A5PA0PJZ0 165 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 OOEPA6NGQ2 149 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 OVOL3O00110 214 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 HAX1O00165 279 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 LGALS8O00214 317 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 SLC33A1O00400 549 aaPredicted RBP6.42□□□□□ -1.38
TDP1-209ENST00000554180 WNT9BO14905 357 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 LANCL1O43813 399 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 SSX5O60225 188 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 PTTG1O95997 202 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 HPXP02790 462 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 CSN2P05814 226 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 PSG2P11465 335 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 PTHLHP12272 177 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 NAT1P18440 290 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 DUSP1P28562 367 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 FAUP35544 74 aaKnown RBP6.42□□□□□ -1.38
TDP1-209ENST00000554180 SNU13P55769 128 aaKnown RBP6.42□□□□□ -1.38
TDP1-209ENST00000554180 TAS2R19P59542 299 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 GMFBP60983 142 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 KLF9Q13886 244 aaPredicted RBP6.42□□□□□ -1.38
TDP1-209ENST00000554180 KCNJ8Q15842 424 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 SRSF7Q16629 238 aaKnown RBP eCLIP6.42□□□□□ -1.38
TDP1-209ENST00000554180 RGS21Q2M5E4 152 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 PAN3Q58A45 887 aaKnown RBP6.42□□□□□ -1.38
TDP1-209ENST00000554180 ATPAF1Q5TC12 328 aaPredicted RBP6.42□□□□□ -1.38
TDP1-209ENST00000554180 ZNF57Q68EA5 555 aaPredicted RBP6.42□□□□□ -1.38
TDP1-209ENST00000554180 STUMQ69YW2 141 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 Q6ZS49 121 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 MOB1BQ7L9L4 216 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 TRAPPC6BQ86SZ2 158 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 BATF2Q8N1L9 274 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 GAPTQ8N292 157 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 SUMF2Q8NBJ7 301 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 MINDY2Q8NBR6 621 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 ANGPTL6Q8NI99 470 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 PPP1R35Q8TAP8 253 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 IGFBPL1Q8WX77 278 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 RDH5Q92781 318 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 SDSLQ96GA7 329 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 COX4I2Q96KJ9 171 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 CMSS1Q9BQ75 279 aaKnown RBP6.42□□□□□ -1.38
TDP1-209ENST00000554180 IFT46Q9NQC8 304 aa6.42□□□□□ -1.38
TDP1-209ENST00000554180 KLK11Q9UBX7 282 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms