RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 NHLRC3Q5JS37 347 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 FAM209AQ5JX71 171 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 DNM1P46Q6ZS02 220 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 WDR86Q86TI4 376 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 C19orf18Q8NEA5 215 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 FCAMRQ8WWV6 532 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 ERGIC1Q969X5 290 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 RAB3CQ96E17 227 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 ABHD1Q96SE0 405 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 EGLN1Q9GZT9 426 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 SCPEP1Q9HB40 452 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 TMEM160Q9NX00 188 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 MTCH1Q9NZJ7 389 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 IGHV4-30-2A0A087WSY4 118 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 A0A096LNT2 108 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 C17orf100A8MU93 164 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 CDIPTO14735 213 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 HS3ST1O14792 307 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 NOS1APO75052 506 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-208ENST00000553868 IGHV1-46P01743 117 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 HLA-DQB1P01920 261 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 SFTPBP07988 381 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 CD55P08174 381 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 PGA5P0DJD9 388 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 IL7P13232 177 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 ZNF16P17020 682 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-208ENST00000553868 TNFRSF1AP19438 455 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 PRSS3P35030 304 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 RBM11P57052 281 aaKnown RBP12.18□□□□□ -0.46
SHMT2-208ENST00000553868 MAB21L1Q13394 359 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 MPV17LQ2QL34 196 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 FAM58AQ8N1B3 248 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 POC1AQ8NBT0 407 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 OR10Z1Q8NGY1 313 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 SMIM4Q8WVI0 70 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 EMG1Q92979 244 aaKnown RBP12.18□□□□□ -0.46
SHMT2-208ENST00000553868 FBXW5Q969U6 566 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 NEDD4LQ96PU5 975 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 OR2V2Q96R30 315 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 SDHCQ99643 169 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-208ENST00000553868 AUNIPQ9H7T9 357 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 ST3GAL6Q9Y274 331 aa12.18□□□□□ -0.46
SHMT2-208ENST00000553868 hCG_1807616A0A1W2PRN6 198 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 OVOL3O00110 214 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 NXPH2O95156 264 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 SOD3P08294 240 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 CSF3P09919 207 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 HIST1H1DP16402 221 aaKnown RBP12.17□□□□□ -0.46
SHMT2-208ENST00000553868 GABRR1P24046 479 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 BLVRBP30043 206 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-208ENST00000553868 CFHR2P36980 270 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 GATA4P43694 442 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 NPBWR2P48146 333 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 AP3S2P59780 193 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 SSBP1Q04837 148 aaKnown RBP12.17□□□□□ -0.46
SHMT2-208ENST00000553868 IL13RA2Q14627 380 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 PNLIPRP3Q17RR3 467 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 CDNFQ49AH0 187 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 PRAMEF6Q5VXH4 476 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 Q6ZTK2 550 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 MUC15Q8N387 334 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 OR11L1Q8NGX0 322 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 SETD6Q8TBK2 473 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 GTF3AQ92664 365 aaKnown RBP12.17□□□□□ -0.46
SHMT2-208ENST00000553868 NEUROG1Q92886 237 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 NRIP2Q9BQI9 281 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 NICN1Q9BSH3 213 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 THAP7Q9BT49 309 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-208ENST00000553868 SPACA1Q9HBV2 294 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHMT2-208ENST00000553868 C1orf123Q9NWV4 160 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 RASL12Q9NYN1 266 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 GLS2Q9UI32 602 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 HSF4Q9ULV5 492 aa12.17□□□□□ -0.46
SHMT2-208ENST00000553868 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 SOCS1O15524 211 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 CA11O75493 328 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 RHBDL1O75783 438 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 LPLP06858 475 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 MELTFP08582 738 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 GSTT2BP0CG30 244 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 PRKACAP17612 351 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 GNG2P59768 71 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 ERVK11-1P61568 191 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 TAF9Q16594 264 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 BAK1Q16611 211 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 MOGAT2Q3SYC2 334 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 ZNF260Q3ZCT1 412 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 AGAP6Q5VW22 663 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 LYSMD2Q8IV50 215 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 LILRB1Q8NHL6 650 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-208ENST00000553868 ITLN1Q8WWA0 313 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 HPS1Q92902 700 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 DECR2Q9NUI1 292 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 UFSP2Q9NUQ7 469 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 PLEKHJ1Q9NW61 149 aa12.16□□□□□ -0.46
SHMT2-208ENST00000553868 RBFOX1Q9NWB1 397 aaKnown RBP12.16□□□□□ -0.46
SHMT2-208ENST00000553868 TAS2R8Q9NYW2 309 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms