RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ZNRF1Q8ND25 227 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 OR1M1Q8NGA1 313 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 OR10Z1Q8NGY1 313 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 OR2T27Q8NH04 317 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 TMEM255BQ8WV15 326 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 DCUN1D4Q92564 292 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 ELL3Q9HB65 397 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-223ENST00000553686 RETNQ9HD89 108 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 C19orf12Q9NSK7 152 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 DPM3Q9P2X0 92 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 POLR1DQ9Y2S0 133 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 MOB4Q9Y3A3 225 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 HSPE1-MOB4S4R3N1 261 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 PKHD1P08F94 4074 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 A0A1W2PPM1 405 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 PMS2P5A8MQ11 134 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 C17orf98A8MV24 154 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 E9PBE3 544 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 F5H5K5 113 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 KPNA4O00629 521 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-223ENST00000553686 RFXANKO14593 260 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 AHCYL1O43865 530 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 SERPINB7O75635 380 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 ANP32DO95626 131 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 C1QCP02747 245 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 OR8U9P0C7N5 309 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 CTLA4P16410 223 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 CCR9P51686 369 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 MRPS25P82663 173 aaKnown RBP4.43□□□□□ -1.7
ATXN3-223ENST00000553686 LDLRAD2Q5SZI1 272 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 TMPRSS11FQ6ZWK6 438 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 GTSCR1Q86UQ5 136 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 OR52E6Q96RD3 313 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 MCHR1Q99705 422 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 WFDC6Q9BQY6 131 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 RAB17Q9H0T7 212 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 TSPYL1Q9H0U9 437 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 RAD21L1Q9H4I0 556 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 WDR55Q9H6Y2 383 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-223ENST00000553686 SIGLEC8Q9NYZ4 499 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 NINJ2Q9NZG7 142 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 ACTR3BQ9P1U1 418 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 LINC00527Q9UJ94 153 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 SORL1Q92673 2214 aa4.43□□□□□ -1.7
ATXN3-223ENST00000553686 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
ATXN3-223ENST00000553686 DYNC1H1Q14204 4646 aaKnown RBP4.42□□□□□ -1.7
ATXN3-223ENST00000553686 TRAPPC13A5PLN9 417 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 H0Y980 276 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 SLC1A7O00341 560 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 DYNC1I1O14576 645 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 SLC22A2O15244 555 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 PLIN3O60664 434 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 TPST2O60704 377 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 OR7A10O76100 309 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 IGHG2P01859 326 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 MT-ND1P03886 318 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 ACSM4P0C7M7 580 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 RBMY1A1P0DJD3 496 aaKnown RBP4.42□□□□□ -1.7
ATXN3-223ENST00000553686 ZNF728P0DKX0 622 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 CCL3L1P16619 93 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 CEACAM3P40198 252 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 MDH1P40925 334 aaKnown RBP4.42□□□□□ -1.7
ATXN3-223ENST00000553686 MNDAP41218 407 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 ACTA2P62736 377 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 ACTG2P63267 376 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 CSNK2BP67870 215 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 ACTC1P68032 377 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 ACTA1P68133 377 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 CBX1P83916 185 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 RUNX1Q01196 453 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 GPR139Q6DWJ6 353 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 SLC35F6Q8N357 371 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 SPC24Q8NBT2 197 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 OR4M1Q8NGD0 313 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 MOSPD2Q8NHP6 518 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 LIPHQ8WWY8 451 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 CREB3L1Q96BA8 519 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 SGTBQ96EQ0 304 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 SDSLQ96GA7 329 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 ZIM3Q96PE6 472 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 MICU1Q9BPX6 476 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 WDR13Q9H1Z4 485 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 OPA3Q9H6K4 179 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 MAGIXQ9H6Y5 334 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 TPT1P8Q9HAU6 139 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 NDE1Q9NXR1 346 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 ADA2Q9NZK5 511 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 RPS6KA6Q9UK32 745 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 SLC7A7Q9UM01 511 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 HHLA2Q9UM44 414 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 STUB1Q9UNE7 303 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 PPP2R2CQ9Y2T4 447 aa4.42□□□□□ -1.7
ATXN3-223ENST00000553686 IGKV1D-17A0A075B6S4 117 aa4.41□□□□□ -1.7
ATXN3-223ENST00000553686 A0A087WUV0 522 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-223ENST00000553686 A0A1W2PP11 408 aa4.41□□□□□ -1.7
ATXN3-223ENST00000553686 HTR3EA5X5Y0 456 aa4.41□□□□□ -1.7
ATXN3-223ENST00000553686 CPSF4LA6NMK7 179 aaKnown RBP4.41□□□□□ -1.7
ATXN3-223ENST00000553686 LEUTXA8MZ59 168 aa4.41□□□□□ -1.7
ATXN3-223ENST00000553686 I3L521 148 aa4.41□□□□□ -1.7
ATXN3-223ENST00000553686 XKRYO14609 159 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms