RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 FOPNLQ96NB1 174 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 SMIM14Q96QK8 99 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 SERPINI1Q99574 410 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 PDCD1LG2Q9BQ51 273 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 CMSS1Q9BQ75 279 aaKnown RBP2.83□□□□□ -1.96
TDP1-207ENST00000553617 AGMATQ9BSE5 352 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 CCDC32Q9BV29 185 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 MS4A8Q9BY19 250 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 OR51I1Q9H343 314 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 CLMPQ9H6B4 373 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 METTL17Q9H7H0 456 aaPredicted RBP2.83□□□□□ -1.96
TDP1-207ENST00000553617 ZNF442Q9H7R0 627 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 ENY2Q9NPA8 101 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 EXOSC4Q9NPD3 245 aaKnown RBP2.83□□□□□ -1.96
TDP1-207ENST00000553617 SLC7A10Q9NS82 523 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 RASL12Q9NYN1 266 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 OPTCQ9UBM4 332 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 TRAPPC4Q9Y296 219 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 ZNF256Q9Y2P7 627 aaPredicted RBP2.83□□□□□ -1.96
TDP1-207ENST00000553617 SIGLEC9Q9Y336 463 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 UTP11Q9Y3A2 253 aaKnown RBP2.83□□□□□ -1.96
TDP1-207ENST00000553617 KLF12Q9Y4X4 402 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 LSM5Q9Y4Y9 91 aaKnown RBP2.83□□□□□ -1.96
TDP1-207ENST00000553617 UHRF1BP1Q6BDS2 1440 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 NUP153P49790 1475 aaKnown RBP2.83□□□□□ -1.96
TDP1-207ENST00000553617 AGRNO00468 2067 aa2.83□□□□□ -1.96
TDP1-207ENST00000553617 SPEF2Q9C093 1822 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 TMEM150BA6NC51 233 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 CCDC160A6NGH7 325 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 LYRM9A8MSI8 78 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 CEACAM18A8MTB9 384 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 G3V2T6 193 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 ZNF593O00488 134 aaPredicted RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 MFNGO00587 321 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 MRPS12O15235 138 aaKnown RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 MGRN1O60291 552 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 ATG12O94817 140 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 HSPB1P04792 205 aaKnown RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 HTR1AP08908 422 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 HOXC4P09017 264 aaPredicted RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 IFI30P13284 250 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 ZNF25P17030 456 aaPredicted RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 PAX6P26367 422 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 AK4P27144 223 aaPredicted RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 HRH1P35367 487 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 RPL35P42766 123 aaKnown RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 MAP2K4P45985 399 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 SERPINB10P48595 397 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 RBP2P50120 134 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 AKR1D1P51857 326 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 DLX1P56177 255 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 CKS1BP61024 79 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 SELENOTP62341 195 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 FMODQ06828 376 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 ZNF616Q08AN1 781 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 KIAA0040Q15053 153 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 SLC25A35Q3KQZ1 300 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 RNASE10Q5GAN6 216 aaKnown RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 C1orf195Q5TG92 126 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 RWDD4Q6NW29 188 aaKnown RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 WDR82Q6UXN9 313 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 Q6ZN92 141 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 RFLNAQ6ZTI6 216 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 RASSF6Q6ZTQ3 369 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 TCF24Q7RTU0 167 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 SLC16A13Q7RTY0 426 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 CDC20BQ86Y33 519 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 PRR22Q8IZ63 422 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 GPD1LQ8N335 351 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 OR4K17Q8NGC6 315 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 OR8U1Q8NH10 309 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 C7orf33Q8WU49 177 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 C1orf54Q8WWF1 131 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 RGP1Q92546 391 aaPredicted RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 SEH1LQ96EE3 360 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 SMARCD1Q96GM5 515 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 C14orf144Q96I85 54 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 KCTD14Q9BQ13 255 aaPredicted RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 RIOK2Q9BVS4 552 aaKnown RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 CHST5Q9GZS9 411 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 OR51J1Q9H342 316 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 FAM96AQ9H5X1 160 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 RPF2Q9H7B2 306 aaKnown RBP2.82□□□□□ -1.96
TDP1-207ENST00000553617 MARCH5Q9NX47 278 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 KCNIP1Q9NZI2 227 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 DOK5Q9P104 306 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 SS18L2Q9UHA2 77 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 NEU3Q9UQ49 428 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 KIF1BO60333 1816 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 DENND4AQ7Z401 1863 aa2.82□□□□□ -1.96
TDP1-207ENST00000553617 TET2Q6N021 2002 aaPredicted RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 GTF3C1Q12789 2109 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 A0A0G2JLM5 398 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 FAM168BA1KXE4 195 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 RBMY1BA6NDE4 496 aaKnown RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 RBMY1EA6NEQ0 496 aaKnown RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 FAM159BA6NKW6 160 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 EVPLLA8MZ36 301 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 C12orf77C9JDV5 145 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 F5H5K5 113 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms