RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 ABLIM2Q6H8Q1 611 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 C16orf47Q6ZP98 133 aaPredicted RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 SLC35E3Q7Z769 313 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 LINC00596Q86U02 117 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 WDR5BQ86VZ2 330 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 MRPL41Q8IXM3 137 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 FBXL14Q8N1E6 418 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 OSR2Q8N2R0 312 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 OR2C3Q8N628 320 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 ZIC4Q8N9L1 334 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 OR5D18Q8NGL1 313 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 OR14L1PQ8NHC6 308 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 THAP3Q8WTV1 239 aaPredicted RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 KCNE4Q8WWG9 221 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 RLN3Q8WXF3 142 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PIGTQ969N2 578 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 MUCL1Q96DR8 90 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 FANCD2OSQ96PS1 177 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 CRB3Q9BUF7 120 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 DUSP23Q9BVJ7 150 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PARD6GQ9BYG4 376 aaPredicted RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 DEFB126Q9BYW3 111 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 ULBP2Q9BZM5 246 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 SLC7A5P2Q9GIP4 190 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PRDM14Q9GZV8 571 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF700Q9H0M5 742 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 TMEM222Q9H0R3 208 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 MRPL18Q9H0U6 180 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PLEKHF2Q9H8W4 249 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 SPACA1Q9HBV2 294 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 WFDC1Q9HC57 220 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 LYRM2Q9NU23 88 aaPredicted RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 TMEM242Q9NWH2 141 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PLEK2Q9NYT0 353 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PRR13Q9NZ81 148 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 RARRES3Q9UL19 164 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 ZDHHC8Q9ULC8 765 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 RNF150Q9ULK6 438 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 NOSIPQ9Y314 301 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 LSM5Q9Y4Y9 91 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 TNRC6BQ9UPQ9 1833 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 CCDC187A0A096LP49 1063 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF816-ZNF321PA0A0X1KG74 233 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 KIR2DS1A0A191URI9 304 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 A0A1W2PPH5 198 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 C5orf63A6NC05 138 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 A6NLC8 198 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF850A8MQ14 1090 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 TRDCB7Z8K6 153 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 NPIPB11E5RHQ5 1161 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 F5H5K5 113 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 RPL36A-HNRNPH2H7BZ11 118 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 M0R036 132 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 BCAT2O15382 392 aaPredicted RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 MPPED1O15442 326 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 YKT6O15498 198 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 PPIHO43447 177 aaKnown RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 NME2P1O60361 137 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 TUSC2O75896 110 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 DFFBO76075 338 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 DIRAS3O95661 229 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 PPYP01298 95 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 IGHV2-70P01814 119 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 FBP1P09467 338 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF806P0C7X5 589 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 FGF5P12034 268 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 HOXB4P17483 251 aaPredicted RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 HOXA5P20719 270 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 FUT3P21217 361 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 GABRR1P24046 479 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 NTF4P34130 210 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 KIR2DS4P43632 304 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 NKX2-1P43699 371 aaPredicted RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 FUT6P51993 359 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 CLDN15P56746 228 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 RAC3P60763 192 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 RAB2AP61019 212 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 RPS23P62266 143 aaKnown RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 FABP9Q0Z7S8 132 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 IL11RAQ14626 422 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 KIR2DS1Q14954 304 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 PCOLCEQ15113 449 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 MPV17LQ2QL34 196 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 SNAI3Q3KNW1 292 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 KHDC3LQ587J8 217 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 NMSQ5H8A3 153 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 SOHLH1Q5JUK2 328 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 FAM69BQ5VUD6 431 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 CARD17Q5XLA6 110 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 IGF2-ASQ6U949 168 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 COLCA1Q6ZS62 124 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 LYZL2Q7Z4W2 148 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 SLC25A45Q8N413 288 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 SLC35G3Q8N808 338 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 SUMF2Q8NBJ7 301 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 OR10AD1Q8NGE0 317 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 OR5D13Q8NGL4 314 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 OR1F12Q8NHA8 337 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 M1APQ8TC57 530 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 C2CD4CQ8TF44 421 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms