RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PKD1L1Q8TDX9 2849 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 MAGEA13PA6NCF6 341 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 PRKACBP22694 351 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 AESQ08117 197 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 ATXN7L3Q14CW9 347 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-206ENST00000553529 ZNF146Q15072 292 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 CDK5R1Q15078 307 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 SSX2Q16385 188 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 Q6ZS46 218 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 SPSB1Q96BD6 273 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 ZNF714Q96N38 554 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 MEGF9Q9H1U4 602 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 FGF20Q9NP95 211 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-206ENST00000553529 DHDHQ9UQ10 334 aa14.73□□□□□ -0.05
SHMT2-206ENST00000553529 RPL36Q9Y3U8 105 aaKnown RBP14.73□□□□□ -0.05
SHMT2-206ENST00000553529 BTBD17A6NE02 478 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 FAM90A8PA6NJQ4 464 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 SNTNA6NMZ2 147 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 GABRPO00591 440 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 SULT1B1O43704 296 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 MPZL2O60487 215 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 CLPXO76031 633 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 OCM2P0CE71 109 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 OCMP0CE72 109 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-206ENST00000553529 ADARB1P78563 741 aaKnown RBP14.72□□□□□ -0.05
SHMT2-206ENST00000553529 DYNC1I2Q13409 638 aaKnown RBP14.72□□□□□ -0.05
SHMT2-206ENST00000553529 KISS1Q15726 138 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 FAM189A2Q15884 450 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 ZNF555Q8NEP9 628 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 STMN2Q93045 179 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 COQ2Q96H96 371 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 Q96MT0 163 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 NR1H4Q96RI1 486 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-206ENST00000553529 C16orf95Q9H693 158 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 HEXA-AS1Q9H8Q6 139 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 EXOSC4Q9NPD3 245 aaKnown RBP14.72□□□□□ -0.05
SHMT2-206ENST00000553529 HILPDAQ9Y5L2 63 aa14.72□□□□□ -0.05
SHMT2-206ENST00000553529 TRAV39A0A0B4J263 110 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 A0A0G2JK05 382 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 PNMA8CA0A1B0GUJ8 204 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 TMEM212A6NML5 194 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 SLC33A1O00400 549 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-206ENST00000553529 TSPAN9O75954 239 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 TMEM225BP0DP42 221 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 CD24P25063 80 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 OR3A4PP47883 348 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 GBX2P52951 348 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-206ENST00000553529 P2RX3P56373 397 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 PIGYQ3MUY2 71 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 ZNF626Q68DY1 528 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 SATL1Q86VE3 508 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 LYG1Q8N1E2 194 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 PARP16Q8N5Y8 322 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 JAM3Q9BX67 310 aa14.71□□□□□ -0.05
SHMT2-206ENST00000553529 IGHV2-26A0A0B4J1V2 119 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 XPNPEP2O43895 674 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 IGHV3-7P01780 117 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 MT-ND2P03891 347 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 ZNF44P15621 663 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 TMEM95Q3KNT9 176 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 ZNF529Q6P280 563 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 TRAPPC6BQ86SZ2 158 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 Q8IYB0 196 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 OR5R1Q8NH85 324 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 RPS4Y2Q8TD47 263 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 GGHQ92820 318 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 COMMD4Q9H0A8 199 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 INPP5EQ9NRR6 644 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 MEGF8Q7Z7M0 2845 aa14.7□□□□□ -0.06
SHMT2-206ENST00000553529 A0A1B0GUS0 222 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 A0A1W2PP11 408 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 A0A1W2PPH5 198 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 A0A1W2PPK0 400 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 hADV38S2A0JD32 116 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 MGST3O14880 152 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 CDRT1O95170 752 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 CYB5AP00167 134 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 RPSAP08865 295 aaKnown RBP14.69□□□□□ -0.06
SHMT2-206ENST00000553529 TGFBR2P37173 567 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 LGALS4P56470 323 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 RPL15P61313 204 aaKnown RBP14.69□□□□□ -0.06
SHMT2-206ENST00000553529 GABPB1Q06547 395 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-206ENST00000553529 KLHL22Q53GT1 634 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 SPIN3Q5JUX0 258 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 SERPINA12Q8IW75 414 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 OR11H6Q8NGC7 330 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 TNFAIP8L1Q8WVP5 186 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 RBMXL1Q96E39 390 aaKnown RBP14.69□□□□□ -0.06
SHMT2-206ENST00000553529 FAM192AQ9GZU8 254 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 ZNF286AQ9HBT8 521 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 TCF7L1Q9HCS4 588 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 NKX1-2Q9UD57 310 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-206ENST00000553529 LINC00312Q9Y6C7 94 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 SESN1Q9Y6P5 492 aa14.69□□□□□ -0.06
SHMT2-206ENST00000553529 MGAM2Q2M2H8 2515 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 RRP9O43818 475 aaKnown RBP14.68□□□□□ -0.06
SHMT2-206ENST00000553529 CCDC159P0C7I6 412 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 GABRA5P31644 462 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 C17orf58Q2M2W7 97 aa14.68□□□□□ -0.06
SHMT2-206ENST00000553529 FAM53AQ6NSI3 398 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms