RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 RAP1BP61224 184 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 SLC7A9P82251 487 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 MICAQ29983 383 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 ZNF585BQ52M93 769 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 WDR38Q5JTN6 314 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 CLEC12AQ5QGZ9 265 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 FAM78BQ5VT40 261 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 RPL13AP3Q6NVV1 102 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 ZFP1Q6P2D0 407 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 SPNS3Q6ZMD2 512 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 PEX26Q7Z412 305 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 OAFQ86UD1 273 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 NPWQ8N729 165 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 OR4P4Q8NGL7 312 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 OR13C6PQ8NH95 151 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 NEIL3Q8TAT5 605 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 CYGBQ8WWM9 190 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 TBX5Q99593 518 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 RIOK2Q9BVS4 552 aaKnown RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 SPNS1Q9H2V7 528 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 CARHSP1Q9Y2V2 147 aaKnown RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 UTP11Q9Y3A2 253 aaKnown RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 ZC3H13Q5T200 1668 aaKnown RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 CTTNBP2Q8WZ74 1663 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 ATRNO75882 1429 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 TEX48A0A1B0GUV7 120 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 EXOC1LA0A1B0GW35 172 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 OR4C46A6NHA9 309 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 BTNL10A8MVZ5 291 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 MANBAO00462 879 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 CRLF1O75462 422 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 REM1O75628 298 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 TRMUO75648 421 aaKnown RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 STK16O75716 305 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 MMP7P09237 267 aaPredicted RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 OR10J4P0C629 311 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 SNRNP35Q16560 246 aaKnown RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 CCL14Q16627 93 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 ACOT6Q3I5F7 207 aaPredicted RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 KLHL12Q53G59 568 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 IDO2Q6ZQW0 420 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 GRINAQ7Z429 371 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 UBALD2Q8IYN6 164 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 C6orf223Q8N319 242 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 LRRC18Q8N456 261 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 TMEM178AQ8NBL3 297 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 OR2A12Q8NGT7 310 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 GRPEL2Q8TAA5 225 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 FLVCR1-AS1Q8TAF5 88 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 SRSF12Q8WXF0 261 aaKnown RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 HIST1H4GQ99525 98 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 GINS3Q9BRX5 216 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 EMC6Q9BV81 110 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 OR51E2Q9H255 320 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 MOB1AQ9H8S9 216 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 TMEM100Q9NV29 134 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 ASB4Q9Y574 426 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 ORC6Q9Y5N6 252 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 PRXQ9BXM0 1461 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 ARHGAP23Q9P227 1491 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 PLXNC1O60486 1568 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 TAF1LQ8IZX4 1826 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 KIF14Q15058 1648 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 NRCAMQ92823 1304 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 ITSN2Q9NZM3 1697 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 SAMD9Q5K651 1589 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 NKTRP30414 1462 aaKnown RBP3.29□□□□□ -1.88
USP44-208ENST00000552440 TRAV39A0A0B4J263 110 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 TRGV8A0A0C4DH27 118 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 A0A0U1RQV1 116 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 IGSF23A1L1A6 192 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 RBFOX3A6NFN3 312 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 K7EQG2 157 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 HCRTR1O43613 425 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 PDE6DO43924 150 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 FGF17O60258 216 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 GALR3O60755 368 aaPredicted RBP3.29□□□□□ -1.88
USP44-208ENST00000552440 NPIPB7O75200 414 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 ALPLP05186 524 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 OR5H8P0DN80 308 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 GABRA1P14867 456 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 TCN2P20062 427 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 MT3P25713 68 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 RCVRNP35243 200 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 CCR6P51684 374 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 HBG1P69891 147 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 HBG2P69892 147 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 SLC35A2P78381 396 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 TTC32Q5I0X7 151 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 ANKRD22Q5VYY1 191 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 STEAP4Q687X5 459 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 MFSD8Q8NHS3 518 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 MCFD2Q8NI22 146 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 CD200R1Q8TD46 325 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 SKA2Q8WVK7 121 aaPredicted RBP3.29□□□□□ -1.88
USP44-208ENST00000552440 SECTM1Q8WVN6 248 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 DCUN1D1Q96GG9 259 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 ZNF354BQ96LW1 612 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 RTBDNQ9BSG5 229 aaPredicted RBP3.29□□□□□ -1.88
USP44-208ENST00000552440 WFDC1Q9HC57 220 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms