RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 TRMT10AQ8TBZ6 339 aaKnown RBP9.27□□□□□ -0.93
PTCH1-222ENST00000551425 LINC00476Q8WZB0 136 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 CORO2AQ92828 525 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 RPEQ96AT9 228 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 ASB9Q96DX5 294 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 NSMCE2Q96MF7 247 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 TAS2R3Q9NYW6 316 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 ACTR3BQ9P1U1 418 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 BAIAP2Q9UQB8 552 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 A0A1W2PPI3 338 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 F8VVB4 439 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 F8VWA3 439 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 DLGAP1O14490 977 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 OVOL1O14753 267 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 MGST3O14880 152 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 ARPC2O15144 300 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 PSPNO60542 156 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 SAP30O75446 220 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 GABRR1P24046 479 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 PSMB8P28062 276 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 GDNFP39905 211 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 MTNR1BP49286 362 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 POU3F4P49335 361 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 RUNX1Q01196 453 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 ZNF616Q08AN1 781 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 RBM39Q14498 530 aaKnown RBP9.26□□□□□ -0.93
PTCH1-222ENST00000551425 CLVS2Q5SYC1 327 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 SLX4IPQ5VYV7 408 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 RASSF6Q6ZTQ3 369 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 COMMD2Q86X83 199 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 ANGPTL5Q86XS5 388 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 Q8N1Y9 231 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 OR6Q1Q8NGQ2 317 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 OR1N2Q8NGR9 330 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 MYOZ3Q8TDC0 251 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 THEM6Q8WUY1 208 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 TOMM40LQ969M1 308 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 ST6GALNAC6Q969X2 333 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 CCDC124Q96CT7 223 aaKnown RBP9.26□□□□□ -0.93
PTCH1-222ENST00000551425 CEP19Q96LK0 163 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 LRGUKQ96M69 825 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 CHST6Q9GZX3 395 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 ABCG5Q9H222 651 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 GPR84Q9NQS5 396 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 FAM206AQ9NX38 181 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 MTCH1Q9NZJ7 389 aa9.26□□□□□ -0.93
PTCH1-222ENST00000551425 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.26□□□□□ -0.93
PTCH1-222ENST00000551425 SAMD4AQ9UPU9 718 aaKnown RBP9.26□□□□□ -0.93
PTCH1-222ENST00000551425 TRGV10A0A0A0MS01 117 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 I3L521 148 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 SLC25A17O43808 307 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 CIB2O75838 187 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 DHRS3O75911 302 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 HAND1O96004 215 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 IFNGP01579 166 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 SEMG1P04279 462 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 MS4A2Q01362 244 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 HNF4GQ14541 408 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 SRSF7Q16629 238 aaKnown RBP eCLIP9.25□□□□□ -0.93
PTCH1-222ENST00000551425 TGIF2LXQ8IUE1 241 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 OR51E1Q8TCB6 317 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 DCUN1D4Q92564 292 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 HRASLS5Q96KN8 279 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 TEAD3Q99594 435 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 TSSK6Q9BXA6 273 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 GPR173Q9NS66 373 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 LIN7CQ9NUP9 197 aaKnown RBP9.25□□□□□ -0.93
PTCH1-222ENST00000551425 SLC7A11Q9UPY5 501 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 POMPQ9Y244 141 aa9.25□□□□□ -0.93
PTCH1-222ENST00000551425 KIAA1109Q2LD37 5005 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 TMEM269A0A1B0GVZ9 245 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 RIIAD1A6NNX1 92 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 RRP9O43818 475 aaKnown RBP9.24□□□□□ -0.93
PTCH1-222ENST00000551425 ZNF3P17036 446 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 OR3A1P47881 315 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 EBI3Q14213 229 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 FLOT2Q14254 428 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 HAGHQ16775 308 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 CYP2R1Q6VVX0 501 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 SGPP2Q8IWX5 399 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 ENTHD1Q8IYW4 607 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 OR8H3Q8N146 312 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 OR2T33Q8NG76 320 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 OR4D6Q8NGJ1 314 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 OR9G1Q8NH87 305 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 PYURFQ96I23 114 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 UBE2E2Q96LR5 201 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 PBOV1Q9GZY1 135 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 MED20Q9H944 212 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 CMC2Q9NRP2 79 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 CHCHD3Q9NX63 227 aaKnown RBP9.24□□□□□ -0.93
PTCH1-222ENST00000551425 GLS2Q9UI32 602 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 KLHDC2Q9Y2U9 406 aa9.24□□□□□ -0.93
PTCH1-222ENST00000551425 AMMECR1Q9Y4X0 333 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-222ENST00000551425 ERICH4A6NGS2 130 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 FAM183AA6NL82 134 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 AQP12BA6NM10 295 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 SELENOFO60613 162 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 IGKV1D-33P01593 117 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 IGKV1-33P01594 117 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms