RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 BLCAPP62952 87 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 AESQ08117 197 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 ZNF676Q8N7Q3 588 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 OR51A2Q8NGJ7 313 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 C10orf35Q96D05 121 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 COQ2Q96H96 371 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 CYYR1Q96J86 154 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 PPIL3Q9H2H8 161 aaKnown RBP12.81□□□□□ -0.36
COX6A1-203ENST00000550009 FAM118AQ9NWS6 357 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 TCF19Q9Y242 345 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 SIRT4Q9Y6E7 314 aaPredicted RBP12.81□□□□□ -0.36
COX6A1-203ENST00000550009 LOC100130705A0A1B0GUX0 176 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 A0A1W2PPH5 198 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 VGLL3A8MV65 326 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 WBP4O75554 376 aaKnown RBP12.8□□□□□ -0.36
COX6A1-203ENST00000550009 KDM4BO94953 1096 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 CD28P10747 220 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 PEX2P28328 305 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 CCR9P51686 369 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 CDK5R1Q15078 307 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 MEDAGQ5VYS4 303 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 ZFP1Q6P2D0 407 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 CCDC54Q8NEL0 328 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 OR13D1Q8NGV5 346 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 CDCA4Q9BXL8 241 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
COX6A1-203ENST00000550009 A0A0G2JK05 382 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 hCG_1809904A0A1W2PP81 198 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 A0A1W2PPE2 198 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 A0A1W2PR64 198 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 A0A1W2PRV1 198 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 SH2D7A6NKC9 451 aaPredicted RBP12.79□□□□□ -0.36
COX6A1-203ENST00000550009 G3V4G9 280 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 HSPB6O14558 160 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 LIMS3P0CW19 117 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 LIMS4P0CW20 117 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 PRKACBP22694 351 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 SOX2P48431 317 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 ETV1P50549 477 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 P2RX3P56373 397 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 MEF2CQ06413 473 aaPredicted RBP12.79□□□□□ -0.36
COX6A1-203ENST00000550009 DOC2BQ14184 412 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 ATXN7L3Q14CW9 347 aaPredicted RBP12.79□□□□□ -0.36
COX6A1-203ENST00000550009 HERPUD1Q15011 391 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 AANATQ16613 207 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 ZSCAN26Q16670 478 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 OR2G6Q5TZ20 316 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 ZBTB49Q6ZSB9 765 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 KCTD20Q7Z5Y7 419 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 PQLC1Q8N2U9 271 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 OR4P4Q8NGL7 312 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 OR4C13Q8NGP0 309 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 OR13C5Q8NGS8 318 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 OR10K1Q8NGX5 313 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 CNIH3Q8TBE1 160 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 CFHR4Q92496 578 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 C9orf16Q9BUW7 83 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 TMEM133Q9H2Q1 129 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 ZCCHC4Q9H5U6 513 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 ZNF286AQ9HBT8 521 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 NEK6Q9HC98 313 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 EXOSC4Q9NPD3 245 aaKnown RBP12.79□□□□□ -0.36
COX6A1-203ENST00000550009 SESN1Q9Y6P5 492 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 NOTCH3Q9UM47 2321 aa12.79□□□□□ -0.36
COX6A1-203ENST00000550009 TRAV39A0A0B4J263 110 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 hADV38S2A0JD32 116 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 SLC33A1O00400 549 aaPredicted RBP12.78□□□□□ -0.36
COX6A1-203ENST00000550009 MGST3O14880 152 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 BAG2O95816 211 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 IGHV3-7P01780 117 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 PRB2P02812 416 aaPredicted RBP12.78□□□□□ -0.36
COX6A1-203ENST00000550009 MT-ND2P03891 347 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 CSF1P09603 554 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 TRAPPC6BQ86SZ2 158 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 Q8IYB0 196 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 NDNFQ8TB73 568 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 SPSB1Q96BD6 273 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 MALSU1Q96EH3 234 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 NR1H4Q96RI1 486 aaPredicted RBP12.78□□□□□ -0.36
COX6A1-203ENST00000550009 COMMD4Q9H0A8 199 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 SEBOXQ9HB31 216 aaPredicted RBP12.78□□□□□ -0.36
COX6A1-203ENST00000550009 TAS2R4Q9NYW5 299 aa12.78□□□□□ -0.36
COX6A1-203ENST00000550009 TBL2Q9Y4P3 447 aaKnown RBP12.78□□□□□ -0.36
COX6A1-203ENST00000550009 ADARB2-AS1A8MUL3 147 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 SH2D1BO14796 132 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 LALBAP00709 142 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 RBP4P02753 201 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 HCKP08631 526 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 TMEM225BP0DP42 221 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 ZNF44P15621 663 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 CDK2P24941 298 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 SLC34A1Q06495 639 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 KISS1Q15726 138 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 C17orf58Q2M2W7 97 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 NSUN5P1Q3KNT7 163 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 OR5AK2Q8NH90 309 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 OR2T6Q8NHC8 308 aa12.77□□□□□ -0.37
COX6A1-203ENST00000550009 WIPF2Q8TF74 440 aaPredicted RBP12.77□□□□□ -0.37
COX6A1-203ENST00000550009 LEAP2Q969E1 77 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms