RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 GRB2P62993 217 aaKnown RBP1.78□□□□□ -2.12
CCDC38-208ENST00000549876 SNRNP35Q16560 246 aaKnown RBP1.78□□□□□ -2.12
CCDC38-208ENST00000549876 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 YIF1BQ5BJH7 314 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 CDKL4Q5MAI5 379 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 FAM45BPQ6NSW5 357 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 TPGS1Q6ZTW0 290 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 FAM183BPQ6ZVS7 135 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 WDR86Q86TI4 376 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 RIMKLAQ8IXN7 391 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 LINC00337Q8N6G1 96 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 ZNF645Q8N7E2 425 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 LINC00304Q8N9R0 145 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 SLC26A10Q8NG04 563 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 OR2M7Q8NG81 312 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 OR5L1Q8NGL2 311 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 ZNF461Q8TAF7 563 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 SYNPRQ8TBG9 265 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 ORAOV1Q8WV07 137 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 DNAJB3Q8WWF6 145 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 ESR2Q92731 530 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 DDIT4LQ96D03 193 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 FAM210AQ96ND0 272 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 SUCNR1Q9BXA5 334 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 MRPL20Q9BYC9 149 aaKnown RBP1.78□□□□□ -2.12
CCDC38-208ENST00000549876 TSGA10Q9BZW7 698 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 MFSD1Q9H3U5 465 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 DHX35Q9H5Z1 703 aaKnown RBP1.78□□□□□ -2.12
CCDC38-208ENST00000549876 SDHAF3Q9NRP4 125 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 COMMD9Q9P000 198 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 ZNF222Q9UK12 451 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 LRRC42Q9Y546 428 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
CCDC38-208ENST00000549876 PTPRTO14522 1441 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 MAP3K5Q99683 1374 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 A0A0G2JMP0 313 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 A0A0X1KG70 313 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 TMEM72A0PK05 275 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 C7orf66A4D0T2 115 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 C5orf63A6NC05 138 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 GOLGA8KD6RF30 607 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 GOLGA8MH3BSY2 632 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 PLIN3O60664 434 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 ADAP1O75689 374 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 OR56A5P0C7T3 313 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 HIST1H1CP16403 213 aaKnown RBP1.77□□□□□ -2.13
CCDC38-208ENST00000549876 LGALS7P47929 136 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 CXCL12P48061 93 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 CDC34P49427 236 aaPredicted RBP1.77□□□□□ -2.13
CCDC38-208ENST00000549876 DLX6P56179 175 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 MAGOHP61326 146 aaKnown RBP1.77□□□□□ -2.13
CCDC38-208ENST00000549876 HBG1P69891 147 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 HBG2P69892 147 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 BNIP2Q12982 314 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 DMC1Q14565 340 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 LINC00303Q3SY05 128 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 ZNF404Q494X3 552 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 SLC36A2Q495M3 483 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 Q499Y3 187 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 COX19Q49B96 90 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 TEX30Q5JUR7 227 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 CLLU1OSQ5K130 101 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 FAM162BQ5T6X4 162 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 KCTD16Q68DU8 428 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 MED27Q6P2C8 311 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 DRAM2Q6UX65 266 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 C10orf107Q8IVU9 208 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 TMEM256Q8N2U0 113 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 SLC25A29Q8N8R3 303 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 TTLQ8NG68 377 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 OR5M1Q8NGP8 315 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 ZNF420Q8TAQ5 688 aaPredicted RBP1.77□□□□□ -2.13
CCDC38-208ENST00000549876 C22orf15Q8WYQ4 148 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 YIPF6Q96EC8 236 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 NEURL3Q96EH8 262 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 PGLYRP3Q96LB9 341 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 TMEM56Q96MV1 263 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 CHCHD7Q9BUK0 85 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 NUDT9Q9BW91 350 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 UGT2B28Q9BY64 529 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 POTEKPQ9BYX7 375 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 TBL1XR1Q9BZK7 514 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 API5Q9BZZ5 524 aaKnown RBP1.77□□□□□ -2.13
CCDC38-208ENST00000549876 RHOFQ9HBH0 211 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 PARP11Q9NR21 331 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 ZNF355PQ9NSJ1 428 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 PLEKHJ1Q9NW61 149 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 IL20Q9NYY1 176 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 USE1Q9NZ43 259 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 FARSAQ9Y285 508 aaKnown RBP1.77□□□□□ -2.13
CCDC38-208ENST00000549876 INSIG2Q9Y5U4 225 aa1.77□□□□□ -2.13
CCDC38-208ENST00000549876 AHDC1Q5TGY3 1603 aaPredicted RBP1.77□□□□□ -2.13
CCDC38-208ENST00000549876 ADCY9O60503 1353 aa1.76□□□□□ -2.13
CCDC38-208ENST00000549876 IGHV3-49A0A0A0MS15 119 aa1.76□□□□□ -2.13
CCDC38-208ENST00000549876 LOC389332A0A1B0GUA5 103 aa1.76□□□□□ -2.13
CCDC38-208ENST00000549876 PGPA6NDG6 321 aa1.76□□□□□ -2.13
CCDC38-208ENST00000549876 CD300LBA8K4G0 201 aa1.76□□□□□ -2.13
CCDC38-208ENST00000549876 F5H5K5 113 aa1.76□□□□□ -2.13
CCDC38-208ENST00000549876 I3L4J1 428 aa1.76□□□□□ -2.13
CCDC38-208ENST00000549876 FFAR1O14842 300 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms