RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 BCDIN3DQ7Z5W3 292 aaKnown RBP10.29□□□□□ -0.76
PTCH1-218ENST00000548945 RTN4RL2Q86UN3 420 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 TCEANCQ8N8B7 351 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 YIPF7Q8N8F6 280 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 DNAAF1Q8NEP3 725 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 OR4P4Q8NGL7 312 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 PP6455Q8WZ26 134 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 EMG1Q92979 244 aaKnown RBP10.29□□□□□ -0.76
PTCH1-218ENST00000548945 SLAMF9Q96A28 289 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 BORCS8Q96FH0 119 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 RCC1LQ96I51 464 aaKnown RBP10.29□□□□□ -0.76
PTCH1-218ENST00000548945 ADI1Q9BV57 179 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 KRT84Q9NSB2 600 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 DPM3Q9P2X0 92 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 WARS2Q9UGM6 360 aaKnown RBP10.29□□□□□ -0.76
PTCH1-218ENST00000548945 ENOPH1Q9UHY7 261 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 GLS2Q9UI32 602 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-218ENST00000548945 MEX3AA1L020 520 aaKnown RBP10.28□□□□□ -0.76
PTCH1-218ENST00000548945 METTL15A6NJ78 407 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 ZAR1LA6NP61 321 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 DENRO43583 198 aaKnown RBP10.28□□□□□ -0.76
PTCH1-218ENST00000548945 CYB5AP00167 134 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 IGHA1P01876 353 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 OR2T7P0C7T2 308 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 JUNBP17275 347 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-218ENST00000548945 GABRR1P24046 479 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 P2RX3P56373 397 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 VAX1Q5SQQ9 334 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 C12orf73Q69YU5 71 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 HEPN1Q6WQI6 88 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 CENPVQ7Z7K6 275 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-218ENST00000548945 FAM58AQ8N1B3 248 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 DHRSXQ8N5I4 330 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 OR52N4Q8NGI2 321 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 CAPSLQ8WWF8 208 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 TFAP2CQ92754 450 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 CREB3L1Q96BA8 519 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 GAL3ST2Q9H3Q3 398 aa10.28□□□□□ -0.76
PTCH1-218ENST00000548945 A0A1W2PRX2 142 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 TCRBV4S1A1TA0A5B7 111 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 FUOMA2VDF0 154 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 K7EIL1 84 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 M0QZK8 103 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 PSPNO60542 156 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 OR2F2O95006 317 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 RPP14O95059 124 aaKnown RBP10.27□□□□□ -0.77
PTCH1-218ENST00000548945 MPIG6BO95866 241 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 PF4P02776 101 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 UBCP0CG48 685 aaKnown RBP10.27□□□□□ -0.77
PTCH1-218ENST00000548945 CD34P28906 385 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 CAPGP40121 348 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 RBP2P50120 134 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 ATP1B3P54709 279 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 MED21Q13503 144 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 ODF4Q2M2E3 257 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 TCTEX1D4Q5JR98 221 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 TTC23Q5W5X9 447 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 SSX6Q7RTT6 188 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 ABHD12Q8N2K0 398 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 TPRX1Q8N7U7 411 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 ZNF555Q8NEP9 628 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 OR4X2Q8NGF9 303 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 CYGBQ8WWM9 190 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 CORO2AQ92828 525 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 CHST6Q9GZX3 395 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 RBFOX1Q9NWB1 397 aaKnown RBP10.27□□□□□ -0.77
PTCH1-218ENST00000548945 TAS2R3Q9NYW6 316 aa10.27□□□□□ -0.77
PTCH1-218ENST00000548945 TRGV10A0A0A0MS01 117 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 LOC107986453A0A1B0GWG9 222 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 A0A1W2PQL4 384 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-218ENST00000548945 LEUTXA8MZ59 168 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 M0R129 80 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 ENTPD6O75354 484 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 MMP23AO75900 390 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 CLIC3O95833 236 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 IGLV1-47P01700 117 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 PRKACBP22694 351 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 EPHA2P29317 976 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 HTR1FP30939 366 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 CEACAM3P40198 252 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 OR3A1P47881 315 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 NPBWR2P48146 333 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 ADARB1P78563 741 aaKnown RBP10.26□□□□□ -0.77
PTCH1-218ENST00000548945 TMED1Q13445 227 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 ZIK1Q3SY52 487 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-218ENST00000548945 UTS2BQ765I0 119 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 TRAPPC6BQ86SZ2 158 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 MYDGFQ969H8 173 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 RBM14Q96PK6 669 aaKnown RBP10.26□□□□□ -0.77
PTCH1-218ENST00000548945 IL4I1Q96RQ9 567 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 MBOAT4Q96T53 435 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 SLC25A33Q9BSK2 321 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 GABARAPL3Q9BY60 117 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 ANKRD60Q9BZ19 345 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 GPR61Q9BZJ8 451 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 RIBC2Q9H4K1 309 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 RHOFQ9HBH0 211 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms