RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 RSU1Q15404 277 aa11.92□□□□□ -0.5
HDAC7-228ENST00000548938 SNAI3Q3KNW1 292 aa11.92□□□□□ -0.5
HDAC7-228ENST00000548938 FBXL14Q8N1E6 418 aa11.92□□□□□ -0.5
HDAC7-228ENST00000548938 CYB561D1Q8N8Q1 229 aa11.92□□□□□ -0.5
HDAC7-228ENST00000548938 NFAM1Q8NET5 270 aaPredicted RBP11.92□□□□□ -0.5
HDAC7-228ENST00000548938 TMEM171Q8WVE6 324 aa11.92□□□□□ -0.5
HDAC7-228ENST00000548938 SMDT1Q9H4I9 107 aa11.92□□□□□ -0.5
HDAC7-228ENST00000548938 METTL7AQ9H8H3 244 aa11.92□□□□□ -0.5
HDAC7-228ENST00000548938 FAM230AA0A1W2PPH8 454 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 DTYMKP23919 212 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 OR2AE1Q8NHA4 323 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 OR14L1PQ8NHC6 308 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 METTL9Q9H1A3 318 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 VPS13AQ96RL7 3174 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 IGKV1-27A0A075B6S5 117 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 NKX2-6A6NCS4 301 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 M0R135 149 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 PIGYQ3MUY2 71 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 FAM69BQ5VUD6 431 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 ANKRD37Q7Z713 158 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 ZNF429Q86V71 674 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 GJC3Q8NFK1 279 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 RNF138Q8WVD3 245 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 ZNF799Q96GE5 643 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 GPR61Q9BZJ8 451 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 C11orf1Q9H5F2 150 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 KIAA1456Q9P272 454 aa11.91□□□□□ -0.5
HDAC7-228ENST00000548938 IGHV1OR21-1A0A087WYE8 117 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 AQP7P3A6NL99 342 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 GEMIN2O14893 280 aaKnown RBP11.9□□□□□ -0.5
HDAC7-228ENST00000548938 SOD3P08294 240 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 NXPH1P58417 271 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 LSM6P62312 80 aaKnown RBP11.9□□□□□ -0.5
HDAC7-228ENST00000548938 ZNF266Q14584 549 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 ICAM4Q14773 271 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 UNKLQ9H9P5 680 aaKnown RBP11.9□□□□□ -0.5
HDAC7-228ENST00000548938 FGF21Q9NSA1 209 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 CABIN1Q9Y6J0 2220 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 K7ESF4 209 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 CYB5BO43169 146 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 MYF5P13349 255 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 GUCA1AP43080 201 aaPredicted RBP11.9□□□□□ -0.5
HDAC7-228ENST00000548938 OR10AD1Q8NGE0 317 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 MOB3AQ96BX8 217 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 ANGPTL4Q9BY76 406 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 MAGT1Q9H0U3 335 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 TMED3Q9Y3Q3 217 aa11.9□□□□□ -0.5
HDAC7-228ENST00000548938 A0A087WWC5 75 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 PITX3O75364 302 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 SCAF4O95104 1147 aaKnown RBP11.89□□□□□ -0.51
HDAC7-228ENST00000548938 TRGC2P03986 189 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 PNLIPP16233 465 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 AADACP22760 399 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 CXCL12P48061 93 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 RUNX1Q01196 453 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 PDCD1Q15116 288 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 Q6ZPA2 131 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 NABP1Q96AH0 204 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 SYT3Q9BQG1 590 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 GLRX2Q9NS18 164 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 GFOD1Q9NXC2 390 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 MUC3AQ02505 3323 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF587BE7ETH6 402 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 LMO7DNF2Z398 122 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 SLC33A1O00400 549 aaPredicted RBP11.89□□□□□ -0.51
HDAC7-228ENST00000548938 TLX3O43711 291 aaPredicted RBP11.89□□□□□ -0.51
HDAC7-228ENST00000548938 SSSCA1O60232 199 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 MSX1P28360 303 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 OTX1P32242 354 aaPredicted RBP11.89□□□□□ -0.51
HDAC7-228ENST00000548938 HNRNPKP61978 463 aaKnown RBP eCLIP11.89□□□□□ -0.515e-8■■■■□ 20.5
HDAC7-228ENST00000548938 KHDC3LQ587J8 217 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 HIST3H2BBQ8N257 126 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 DEFB123Q8N688 67 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 OR2M3Q8NG83 312 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 S100PBPQ96BU1 408 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF501Q96CX3 271 aaPredicted RBP11.89□□□□□ -0.51
HDAC7-228ENST00000548938 C14orf144Q96I85 54 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 PLEK2Q9NYT0 353 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 SLC7A11Q9UPY5 501 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 SIT1Q9Y3P8 196 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 WSB1Q9Y6I7 421 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 WDFY3Q8IZQ1 3526 aa11.89□□□□□ -0.51
HDAC7-228ENST00000548938 CCDC163A0A0D9SF12 145 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 CXorf65A6NEN9 183 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 PPP1R2P9O14990 202 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
HDAC7-228ENST00000548938 EPHA1P21709 976 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 Q6ZSR3 168 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 P4HA3Q7Z4N8 544 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 OR5C1Q8NGR4 320 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 IGHV3-15A0A0B4J1V0 119 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 IGKV1-12A0A0C4DH73 117 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 OR2J2O76002 312 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 CST7O76096 145 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 F10P00742 488 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 IGKV1D-12P01611 117 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 NKX2-1P43699 371 aaPredicted RBP11.88□□□□□ -0.51
HDAC7-228ENST00000548938 HERV-K104P61576 105 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 NKX6-1P78426 367 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms