RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ZNF793Q6ZN11 406 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 MRGPREQ86SM8 312 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 SLC37A2Q8TED4 501 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 OR2V2Q96R30 315 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 TBC1D29Q9UFV1 150 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 STARD10Q9Y365 291 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 A0A087WWC5 75 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 ALG1L2C9J202 215 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 SCRG1O75711 98 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 TRGC2P03986 189 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 DEFB103AP81534 67 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 NR0B2Q15466 257 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 PLAC9Q5JTB6 97 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 DHRS11Q6UWP2 260 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 TMEM183AQ8IXX5 376 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 VN1R2Q8NFZ6 395 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 TSPAN32Q96QS1 320 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 TPPP3Q9BW30 176 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 MED29Q9NX70 200 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 WIPI2Q9Y4P8 454 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 OR51B4Q9Y5P0 310 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 LRRC37A2A6NM11 1700 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 DNASE2O00115 360 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-212ENST00000546744 PPOXP50336 477 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 RPS23P62266 143 aaKnown RBP11.35□□□□□ -0.59
PTCH1-212ENST00000546744 GNG3P63215 75 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 MUCL1Q96DR8 90 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 PARD6GQ9BYG4 376 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-212ENST00000546744 SRD5A3Q9H8P0 318 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 CACNG5Q9UF02 275 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 K7ESM1 405 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 ISLRO14498 428 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 HS3ST1O14792 307 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 CCR2P41597 374 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 MICBQ29980 383 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 C12orf76Q8N812 135 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-212ENST00000546744 KCNK15Q9H427 330 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 VSIG4Q9Y279 399 aa11.35□□□□□ -0.59
PTCH1-212ENST00000546744 A0A0B4J293 547 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 OPN1LWP04000 364 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 CD46P15529 392 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 LSM6P62312 80 aaKnown RBP11.34□□□□□ -0.59
PTCH1-212ENST00000546744 ZNF124Q15973 351 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 GVQW1Q8N7I0 195 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 AGBL5Q8NDL9 886 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 OR10V1Q8NGI7 309 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 OR1L4Q8NGR5 311 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 PRSS3P2Q8NHM4 247 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 GPR132Q9UNW8 380 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 OR5AL1P0C617 328 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 HOXA5P20719 270 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 GALNSP34059 522 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 GLIPR1P48060 266 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 PGFP49763 221 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 LIMK1P53667 647 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 TMEM255AQ5JRV8 349 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 PSMG4Q5JS54 123 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 ZBP1Q9H171 429 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 KCNMB2Q9Y691 235 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 MPDU1O75352 247 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 ANKRD34CP0C6C1 535 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 NKAIN1Q4KMZ8 207 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 OR1F12Q8NHA8 337 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 GPR61Q9BZJ8 451 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 SLC25A22Q9H936 323 aa11.34□□□□□ -0.59
PTCH1-212ENST00000546744 TECRQ9NZ01 308 aaKnown RBP11.34□□□□□ -0.59
PTCH1-212ENST00000546744 HLA-DQA1P01909 254 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 C10orf111Q8N326 155 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 ELOVL1Q9BW60 279 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 NGBQ9NPG2 151 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 A0A1B0GV72 72 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 A0A1W2PQD3 144 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 TRDCB7Z8K6 153 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 RER1O15258 196 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 EFSO43281 561 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 DANCRP0C864 163 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 FOLR2P14207 255 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 PRICKLE4Q2TBC4 344 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 C1orf100Q5SVJ3 147 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 CPEB3Q8NE35 698 aaKnown RBP11.33□□□□□ -0.6
PTCH1-212ENST00000546744 OR4D11Q8NGI4 311 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 VN1R17PQ8TDU5 208 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 BCL2L2Q92843 193 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-212ENST00000546744 BADQ92934 168 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 MRPL24Q96A35 216 aaKnown RBP11.33□□□□□ -0.6
PTCH1-212ENST00000546744 PMCHL2Q9BQD1 86 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 WDR13Q9H1Z4 485 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 A0A1B0GV90 55 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 OR5B21A6NL26 309 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 LRRC30A6NM36 301 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 CD74P04233 296 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 FAM87AP0C7U9 286 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 LCN2P80188 198 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 STXBP6Q8NFX7 210 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 IER2Q9BTL4 223 aa11.33□□□□□ -0.6
PTCH1-212ENST00000546744 LRFN3Q9BTN0 628 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 326.6 ms