RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 OR2H2O95918 312 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 DYNC1I2Q13409 638 aaKnown RBP17.03■□□□□ 0.32
SCARB1-210ENST00000545493 HABP2Q14520 560 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-210ENST00000545493 C11orf88Q6PI97 169 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 C11orf44Q8N8P7 122 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 CFHR4Q92496 578 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 MALSU1Q96EH3 234 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 NKX3-1Q99801 234 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-210ENST00000545493 C9orf16Q9BUW7 83 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 COMMD4Q9H0A8 199 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 AMBNQ9NP70 447 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 EXOSC4Q9NPD3 245 aaKnown RBP17.03■□□□□ 0.32
SCARB1-210ENST00000545493 GSTK1Q9Y2Q3 226 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 E9PI62 339 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 CSF1P09603 554 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 ERP29P30040 261 aaKnown RBP17.02■□□□□ 0.32
SCARB1-210ENST00000545493 ZP1P60852 638 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 BAIAP2L2Q6UXY1 529 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 Q6ZTK2 550 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 RHOXF1Q8NHV9 184 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 RPS4Y2Q8TD47 263 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 TMEM133Q9H2Q1 129 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 ZCCHC4Q9H5U6 513 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 S100A14Q9HCY8 104 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 ABCB10Q9NRK6 738 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 ERVK13-1Q9NX77 482 aa17.02■□□□□ 0.32
SCARB1-210ENST00000545493 ZFPL1O95159 310 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 OCM2P0CE71 109 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 OCMP0CE72 109 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-210ENST00000545493 PRAMEF5Q5TYX0 476 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 TRAPPC6BQ86SZ2 158 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 Q8N2B8 174 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 PQLC1Q8N2U9 271 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 OR52I1Q8NGK6 324 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 OR4P4Q8NGL7 312 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 MRPL48Q96GC5 212 aaKnown RBP17.01■□□□□ 0.31
SCARB1-210ENST00000545493 PDCD1LG2Q9BQ51 273 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 INPP5EQ9NRR6 644 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 SERTAD4Q9NUC0 356 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 GLS2Q9UI32 602 aa17.01■□□□□ 0.31
SCARB1-210ENST00000545493 UBE2J1Q9Y385 318 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-210ENST00000545493 LOC100130705A0A1B0GUX0 176 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 MPZL2O60487 215 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 VSIG10L2P0DP72 767 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 GDNFP39905 211 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 DYNLT3P51808 116 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 RAB40BQ12829 278 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 IL18R1Q13478 541 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 MINOS1Q5TGZ0 78 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 RGP1Q92546 391 aaPredicted RBP17■□□□□ 0.31
SCARB1-210ENST00000545493 CDCA4Q9BXL8 241 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 CLEC7AQ9BXN2 247 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 NEK6Q9HC98 313 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 HILPDAQ9Y5L2 63 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 MINOS1-NBL1R4GNA1 71 aa17■□□□□ 0.31
SCARB1-210ENST00000545493 TMEM212A6NML5 194 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 SULT1B1O43704 296 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 FADS2O95864 444 aaKnown RBP16.99■□□□□ 0.31
SCARB1-210ENST00000545493 LMO1P25800 156 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 Q6P435 159 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 C1QL4Q86Z23 238 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 SAXO1Q8IYX7 474 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 PARP16Q8N5Y8 322 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 NDNFQ8TB73 568 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 COQ2Q96H96 371 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 Q96MT0 163 aa16.99■□□□□ 0.31
SCARB1-210ENST00000545493 MRPS18AQ9NVS2 196 aaKnown RBP16.99■□□□□ 0.31
SCARB1-210ENST00000545493 FAM172BPA6NC97 362 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 F2RL2O00254 374 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 SLC33A1O00400 549 aaPredicted RBP16.98■□□□□ 0.31
SCARB1-210ENST00000545493 SH2D1BO14796 132 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 CSN2P05814 226 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 HCKP08631 526 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 CCDC159P0C7I6 412 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 ZNF44P15621 663 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 GLIPR1P48060 266 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 AESQ08117 197 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 MRPL28Q13084 256 aaKnown RBP16.98■□□□□ 0.31
SCARB1-210ENST00000545493 KISS1Q15726 138 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 LPCAT4Q643R3 524 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 ZBTB49Q6ZSB9 765 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 WIPF2Q8TF74 440 aaPredicted RBP16.98■□□□□ 0.31
SCARB1-210ENST00000545493 TSEN15Q8WW01 171 aaKnown RBP16.98■□□□□ 0.31
SCARB1-210ENST00000545493 RHOFQ9HBH0 211 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 FAM118AQ9NWS6 357 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 PITPNC1Q9UKF7 332 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 DHDHQ9UQ10 334 aa16.98■□□□□ 0.31
SCARB1-210ENST00000545493 TRGV10A0A0A0MS01 117 aa16.97■□□□□ 0.31
SCARB1-210ENST00000545493 A0A0G2JK05 382 aa16.97■□□□□ 0.31
SCARB1-210ENST00000545493 WBP4O75554 376 aaKnown RBP16.97■□□□□ 0.31
SCARB1-210ENST00000545493 ALX3O95076 343 aa16.97■□□□□ 0.31
SCARB1-210ENST00000545493 LIMS3P0CW19 117 aa16.97■□□□□ 0.31
SCARB1-210ENST00000545493 LIMS4P0CW20 117 aa16.97■□□□□ 0.31
SCARB1-210ENST00000545493 CDK2P24941 298 aa16.97■□□□□ 0.31
SCARB1-210ENST00000545493 GTF2A1P52655 376 aaPredicted RBP16.97■□□□□ 0.31
SCARB1-210ENST00000545493 SLC34A1Q06495 639 aa16.97■□□□□ 0.31
SCARB1-210ENST00000545493 ATXN7L3Q14CW9 347 aaPredicted RBP16.97■□□□□ 0.31
SCARB1-210ENST00000545493 CDK5R1Q15078 307 aa16.97■□□□□ 0.31
SCARB1-210ENST00000545493 SMN1Q16637 294 aaKnown RBP16.97■□□□□ 0.31
SCARB1-210ENST00000545493 TMEM95Q3KNT9 176 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms