RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 WNT4P56705 351 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 TAS2R43P59537 309 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 SLC35A2P78381 396 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 BDH1Q02338 343 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 FOXL1Q12952 345 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 Q499Y3 187 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 MIDNQ504T8 468 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 C12orf54Q6X4T0 127 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 LYPD6Q86Y78 171 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 PNKDQ8N490 385 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 STX19Q8N4C7 294 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 ZFP41Q8N8Y5 198 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 OR51T1Q8NGJ9 327 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 OR13C5Q8NGS8 318 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 SSMEM1Q8WWF3 244 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 ORAI1Q96D31 301 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 CHIAQ9BZP6 476 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 MEGF9Q9H1U4 602 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 DUSP21Q9H596 190 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 TMEM138Q9NPI0 162 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 ZNRD1Q9P1U0 126 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 GSTK1Q9Y2Q3 226 aa9.31□□□□□ -0.92
YBX3-216ENST00000544622 LSM2Q9Y333 95 aaKnown RBP9.31□□□□□ -0.92
YBX3-216ENST00000544622 FAM181BA6NEQ2 426 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 FAM90A8PA6NJQ4 464 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 SH2D1BO14796 132 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 MGST3O14880 152 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 IGHV4-59P01825 116 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 CSN2P05814 226 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 ZNF728P0DKX0 622 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 TMEM225BP0DP42 221 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 FSTP19883 344 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 EEF1B2P24534 225 aaKnown RBP9.3□□□□□ -0.92
YBX3-216ENST00000544622 SAA4P35542 130 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 MTNR1BP49286 362 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 RPL15P61313 204 aaKnown RBP9.3□□□□□ -0.92
YBX3-216ENST00000544622 RELBQ01201 579 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 RIPK1Q13546 671 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 IRF3Q14653 427 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 GRK1Q15835 563 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 FIP1L1Q6UN15 594 aaKnown RBP9.3□□□□□ -0.92
YBX3-216ENST00000544622 GDPD3Q7L5L3 318 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 TPRX1Q8N7U7 411 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 CHST4Q8NCG5 386 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 C17orf50Q8WW18 174 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 SGCDQ92629 289 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 DYRK2Q92630 601 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 TAF15Q92804 592 aaKnown RBP eCLIP9.3□□□□□ -0.92
YBX3-216ENST00000544622 CORO2AQ92828 525 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 CHST6Q9GZX3 395 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 HEXA-AS1Q9H8Q6 139 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 GLS2Q9UI32 602 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 PCDHGB5Q9Y5G0 923 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 LINC00312Q9Y6C7 94 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 DSCAML1Q8TD84 2053 aa9.3□□□□□ -0.92
YBX3-216ENST00000544622 hCG_1809904A0A1W2PP81 198 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 A0A1W2PPE2 198 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 A0A1W2PR64 198 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 A0A1W2PRV1 198 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 hADV38S2A0JD32 116 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 MEIOCA2RUB1 952 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 MAGEA13PA6NCF6 341 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 PTGES3LE9PB15 166 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 H0YHG0 523 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 SLC33A1O00400 549 aaPredicted RBP9.29□□□□□ -0.92
YBX3-216ENST00000544622 PIN1P1O15428 100 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 MAGEB3O15480 346 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 FBP1P09467 338 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 IGHV1-8P0DP01 117 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 CELP19835 753 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 GABRR1P24046 479 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 ZNF93P35789 620 aaPredicted RBP9.29□□□□□ -0.92
YBX3-216ENST00000544622 PTGFRP43088 359 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 BMXP51813 675 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 GP2P55259 537 aaKnown RBP9.29□□□□□ -0.92
YBX3-216ENST00000544622 EDDM3BP56851 147 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 PAX5Q02548 391 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 TAF9Q16594 264 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 NHLRC3Q5JS37 347 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 UNQ9370/PRO34162Q6UXP9 181 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 BEND2Q8NDZ0 799 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 OR11H6Q8NGC7 330 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 PPP1R35Q8TAP8 253 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 CPNE2Q96FN4 548 aaPredicted RBP9.29□□□□□ -0.92
YBX3-216ENST00000544622 DPAGT1Q9H3H5 408 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 EXOSC4Q9NPD3 245 aaKnown RBP9.29□□□□□ -0.92
YBX3-216ENST00000544622 IL36GQ9NZH8 169 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 FOXJ3Q9UPW0 622 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 ERGIC3Q9Y282 383 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 FAM96BQ9Y3D0 163 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 MMP24Q9Y5R2 645 aa9.29□□□□□ -0.92
YBX3-216ENST00000544622 TRAV8-7A0A075B6U6 113 aa9.28□□□□□ -0.92
YBX3-216ENST00000544622 TRAV24A0A0B4J272 114 aa9.28□□□□□ -0.92
YBX3-216ENST00000544622 A0A1W2PRD5 423 aa9.28□□□□□ -0.92
YBX3-216ENST00000544622 A0A1W2PRF3 423 aa9.28□□□□□ -0.92
YBX3-216ENST00000544622 A0A1W2PRM7 423 aa9.28□□□□□ -0.92
YBX3-216ENST00000544622 ODF3BA8MYP8 253 aa9.28□□□□□ -0.92
YBX3-216ENST00000544622 SIRPB1O00241 398 aa9.28□□□□□ -0.92
YBX3-216ENST00000544622 MYL12BO14950 172 aa9.28□□□□□ -0.92
YBX3-216ENST00000544622 SC5DO75845 299 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms