RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SWI5Q1ZZU3 235 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 PLA1AQ53H76 456 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 MUC15Q8N387 334 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 OR4S1Q8NGB4 309 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 OR4C16Q8NGL9 310 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 HDHD3Q9BSH5 251 aaPredicted RBP25.66■■□□□ 1.7
CCM2-219ENST00000544363 TNFRSF1AP19438 455 aa25.65■■□□□ 1.7
CCM2-219ENST00000544363 HLA-DMAP28067 261 aa25.65■■□□□ 1.7
CCM2-219ENST00000544363 CCL8P80075 99 aa25.65■■□□□ 1.7
CCM2-219ENST00000544363 TESK1Q15569 626 aa25.65■■□□□ 1.7
CCM2-219ENST00000544363 GLCCI1Q86VQ1 547 aa25.65■■□□□ 1.7
CCM2-219ENST00000544363 ZCCHC24Q8N2G6 241 aaKnown RBP25.65■■□□□ 1.7
CCM2-219ENST00000544363 SUMF2Q8NBJ7 301 aa25.65■■□□□ 1.7
CCM2-219ENST00000544363 MMP28Q9H239 520 aa25.65■■□□□ 1.7
CCM2-219ENST00000544363 TRAV24A0A0B4J272 114 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 MCRIP1C9JLW8 97 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 SH2D1BO14796 132 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 CD74P04233 296 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 GLAP06280 429 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 ZNF44P15621 663 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 GIFP27352 417 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 HOXA4Q00056 320 aaPredicted RBP25.64■■□□□ 1.7
CCM2-219ENST00000544363 SMIM21Q3B7S5 101 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 FAAP20Q6NZ36 180 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 HOGA1Q86XE5 327 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 DYRK2Q92630 601 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 DPAGT1Q9H3H5 408 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 MCUBQ9NWR8 336 aa25.64■■□□□ 1.7
CCM2-219ENST00000544363 LHBP01229 141 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 OR52W1Q6IF63 320 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 PLET1Q6UQ28 207 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 GCSAMQ8N6F7 178 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 OR4D10Q8NGI6 311 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 Q8TCH9 128 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 SNAPC3Q92966 411 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 ST6GALNAC5Q9BVH7 336 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 CACNG6Q9BXT2 260 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 EGLN1Q9GZT9 426 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 GLS2Q9UI32 602 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 ZNF230Q9UIE0 474 aaPredicted RBP25.63■■□□□ 1.69
CCM2-219ENST00000544363 hCG_2014768A0A024R1R8 64 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 HS3ST1O14792 307 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 RAB3DO95716 219 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 OR2H2O95918 312 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 KNG1P01042 644 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 EGR1P18146 543 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 DTYMKP23919 212 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 DPCDQ9BVM2 203 aaPredicted RBP25.63■■□□□ 1.69
CCM2-219ENST00000544363 DECR2Q9NUI1 292 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 RNF7Q9UBF6 113 aa25.63■■□□□ 1.69
CCM2-219ENST00000544363 ZNF462Q96JM2 2506 aa25.62■■□□□ 1.69
CCM2-219ENST00000544363 PYCARD-AS1I3L0S3 204 aa25.62■■□□□ 1.69
CCM2-219ENST00000544363 HAND1O96004 215 aa25.62■■□□□ 1.69
CCM2-219ENST00000544363 RNF224P0DH78 156 aa25.62■■□□□ 1.69
CCM2-219ENST00000544363 RBMXP38159 391 aaKnown RBP25.62■■□□□ 1.69
CCM2-219ENST00000544363 CCR6P51684 374 aa25.62■■□□□ 1.69
CCM2-219ENST00000544363 SFRP4Q6FHJ7 346 aaPredicted RBP25.62■■□□□ 1.69
CCM2-219ENST00000544363 RDH5Q92781 318 aa25.62■■□□□ 1.69
CCM2-219ENST00000544363 CHST6Q9GZX3 395 aa25.62■■□□□ 1.69
CCM2-219ENST00000544363 ZNF701Q9NV72 531 aaPredicted RBP25.62■■□□□ 1.69
CCM2-219ENST00000544363 OR14J1Q9UGF5 321 aa25.62■■□□□ 1.69
CCM2-219ENST00000544363 PPP1R3CQ9UQK1 317 aa25.62■■□□□ 1.69
CCM2-219ENST00000544363 TBPP20226 339 aa25.61■■□□□ 1.69
CCM2-219ENST00000544363 SNRPD2P62316 118 aaKnown RBP25.61■■□□□ 1.69
CCM2-219ENST00000544363 RBM39Q14498 530 aaKnown RBP25.61■■□□□ 1.69
CCM2-219ENST00000544363 FAM90A1Q86YD7 464 aa25.61■■□□□ 1.69
CCM2-219ENST00000544363 OR11L1Q8NGX0 322 aa25.61■■□□□ 1.69
CCM2-219ENST00000544363 NEK7Q8TDX7 302 aa25.61■■□□□ 1.69
CCM2-219ENST00000544363 COPZ2Q9P299 210 aa25.61■■□□□ 1.69
CCM2-219ENST00000544363 NPTNQ9Y639 398 aa25.61■■□□□ 1.69
CCM2-219ENST00000544363 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP25.6■■□□□ 1.69
CCM2-219ENST00000544363 M0QYG6 137 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 SIRPB1O00241 398 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 SLC33A1O00400 549 aaPredicted RBP25.6■■□□□ 1.69
CCM2-219ENST00000544363 HSPB6O14558 160 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 FCGR3AP08637 254 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 BPIFB2Q8N4F0 458 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 BEST4Q8NFU0 473 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 OR4K15Q8NH41 348 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 TINAGL1Q9GZM7 467 aaPredicted RBP25.6■■□□□ 1.69
CCM2-219ENST00000544363 SAP30LQ9HAJ7 183 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 C12orf4Q9NQ89 552 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 CACNA1DQ01668 2161 aa25.6■■□□□ 1.69
CCM2-219ENST00000544363 AMY2BP19961 511 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 MEF2DQ14814 521 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 ZNF782Q6ZMW2 699 aaPredicted RBP25.59■■□□□ 1.69
CCM2-219ENST00000544363 MEX3BQ6ZN04 569 aaKnown RBP25.59■■□□□ 1.69
CCM2-219ENST00000544363 BOLLQ8N9W6 283 aaKnown RBP25.59■■□□□ 1.69
CCM2-219ENST00000544363 OR56B4Q8NH76 319 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 MAFIPQ8WZ33 124 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 EDARQ9UNE0 448 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 KLF2Q9Y5W3 355 aaPredicted RBP25.59■■□□□ 1.69
CCM2-219ENST00000544363 PKDREJQ9NTG1 2253 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 KMT2BQ9UMN6 2715 aaPredicted RBP25.59■■□□□ 1.69
CCM2-219ENST00000544363 FAM221AA4D161 298 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 TCRBP04435 133 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 LMO1P25800 156 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 HRH1P35367 487 aa25.59■■□□□ 1.69
CCM2-219ENST00000544363 RNASE10Q5GAN6 216 aaKnown RBP25.59■■□□□ 1.69
CCM2-219ENST00000544363 FAIMQ9NVQ4 179 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms