RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SPACA1Q9HBV2 294 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 EHFQ9NZC4 300 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 ZNF69Q9UC07 566 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 DUSP13Q9UII6 198 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 OSGIN2Q9Y236 505 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 IGHV3-64DA0A0J9YX35 117 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 FAM221AA4D161 298 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 CEACAM18A8MTB9 384 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 PTAFRP25105 342 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 KLF3P57682 345 aaPredicted RBP16.82■□□□□ 0.28
COPS7A-218ENST00000543939 TSPAN5P62079 268 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 CDK10Q15131 360 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 Q6ZPA2 131 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 TMED4Q7Z7H5 227 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 TMEM17Q86X19 198 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 FN3KRPQ9HA64 309 aa16.82■□□□□ 0.28
COPS7A-218ENST00000543939 SDCBPO00560 298 aaPredicted RBP16.81■□□□□ 0.28
COPS7A-218ENST00000543939 CCL21O00585 134 aa16.81■□□□□ 0.28
COPS7A-218ENST00000543939 OR4E1P0C645 316 aa16.81■□□□□ 0.28
COPS7A-218ENST00000543939 PPP3CBP16298 524 aa16.81■□□□□ 0.28
COPS7A-218ENST00000543939 NKX2-5P52952 324 aaPredicted RBP16.81■□□□□ 0.28
COPS7A-218ENST00000543939 GRK1Q15835 563 aa16.81■□□□□ 0.28
COPS7A-218ENST00000543939 Q6P435 159 aa16.81■□□□□ 0.28
COPS7A-218ENST00000543939 VHLLQ6RSH7 139 aa16.81■□□□□ 0.28
COPS7A-218ENST00000543939 POC1AQ8NBT0 407 aa16.81■□□□□ 0.28
COPS7A-218ENST00000543939 NUP37Q8NFH4 326 aa16.81■□□□□ 0.28
COPS7A-218ENST00000543939 ATRXP46100 2492 aa16.81■□□□□ 0.28
COPS7A-218ENST00000543939 CHD3Q12873 2000 aaKnown RBP16.8■□□□□ 0.28
COPS7A-218ENST00000543939 DPRXA6NFQ7 191 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 MCRIP1C9JLW8 97 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 GLAP06280 429 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 ASCL1P50553 236 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 ARPC4P59998 168 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 MZT1Q08AG7 82 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 PRAMEF6Q5VXH4 476 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 PCSK4Q6UW60 755 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 C17orf107Q6ZR85 190 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 SLC25A42Q86VD7 318 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 SUMF2Q8NBJ7 301 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 MARCH1Q8TCQ1 289 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 GTF3AQ92664 365 aaKnown RBP16.8■□□□□ 0.28
COPS7A-218ENST00000543939 SYT3Q9BQG1 590 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 HES4Q9HCC6 221 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 ZNF222Q9UK12 451 aa16.8■□□□□ 0.28
COPS7A-218ENST00000543939 MEIKINA0A087WXM9 373 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 TRAV24A0A0B4J272 114 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 NAPSAO96009 420 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 MPPED2Q15777 294 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 C4orf46Q504U0 113 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 ZNF826PQ6ZT77 177 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 MUC20Q8N307 709 aaPredicted RBP16.79■□□□□ 0.28
COPS7A-218ENST00000543939 SPICQ8N5J4 248 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 ZNF431Q8TF32 576 aaPredicted RBP16.79■□□□□ 0.28
COPS7A-218ENST00000543939 ZNF286AQ9HBT8 521 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 ZSCAN5BA6NJL1 495 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 ERVH48-1M5A8F1 160 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 NXPH2O95156 264 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 PTBP3O95758 552 aaKnown RBP16.79■□□□□ 0.28
COPS7A-218ENST00000543939 ANXA3P12429 323 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 CD200P41217 278 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 ZNF146Q15072 292 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 SRSF7Q16629 238 aaKnown RBP eCLIP16.79■□□□□ 0.28
COPS7A-218ENST00000543939 AADACL3Q5VUY0 350 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 OR2Z1Q8NG97 314 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 WFIKKN1Q96NZ8 548 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 MRPL37Q9BZE1 423 aaKnown RBP16.79■□□□□ 0.28
COPS7A-218ENST00000543939 GPR132Q9UNW8 380 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 NPTNQ9Y639 398 aa16.79■□□□□ 0.28
COPS7A-218ENST00000543939 A6NLC8 198 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 DEGS1O15121 323 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 C1QBP02746 253 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 CHRNB4P30926 498 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 NPY4RP50391 375 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 FBXL19-AS1Q494R0 122 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 ZNF660Q6AZW8 331 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-218ENST00000543939 WDR82Q6UXN9 313 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 Q6ZS49 121 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 PEG10Q86TG7 708 aaKnown RBP16.78■□□□□ 0.28
COPS7A-218ENST00000543939 NOXA1Q86UR1 476 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 DPCDQ9BVM2 203 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-218ENST00000543939 CHMP1AQ9HD42 196 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-218ENST00000543939 NECAP2Q9NVZ3 263 aa16.78■□□□□ 0.28
COPS7A-218ENST00000543939 HSPB6O14558 160 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 ABCD4O14678 606 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 HS3ST1O14792 307 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 FPR2P25090 351 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 BSPH1Q075Z2 132 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 SPIN3Q5JUX0 258 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 FAHD2BQ6P2I3 314 aaPredicted RBP16.77■□□□□ 0.28
COPS7A-218ENST00000543939 SLC22A25Q6T423 547 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 NEK7Q8TDX7 302 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 RDH5Q92781 318 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 MRPL24Q96A35 216 aaKnown RBP16.77■□□□□ 0.28
COPS7A-218ENST00000543939 FAHD2AQ96GK7 314 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 TRAF4Q9BUZ4 470 aaPredicted RBP16.77■□□□□ 0.28
COPS7A-218ENST00000543939 Q9N2K0 584 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 UFSP2Q9NUQ7 469 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 MGAT4CQ9UBM8 478 aa16.77■□□□□ 0.28
COPS7A-218ENST00000543939 OR5H14A6NHG9 310 aa16.76■□□□□ 0.27
COPS7A-218ENST00000543939 ATXN7O15265 892 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms